RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ME2P23368 584 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 EIF1AXP47813 144 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 TPD52P55327 224 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 CTBP2P56545 445 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 POU6F2P78424 691 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 DUSP5Q16690 384 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 ATP6AP1LQ52LC2 224 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 BHLHB9Q6PI77 547 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 FIGNL1Q6PIW4 674 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 BIVMQ86UB2 503 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 COX18Q8N8Q8 333 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 ZNF610Q8N9Z0 462 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 ZNF527Q8NB42 609 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 OR56A1Q8NGH5 318 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 B4GALNT2Q8NHY0 566 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 COQ8BQ96D53 544 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 FAM120BQ96EK7 910 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 ZIM3Q96PE6 472 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 OPN3Q9H1Y3 402 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 OR10A4Q9H209 315 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 TIGARQ9NQ88 270 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 ZCCHC3Q9NUD5 404 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 MED17Q9NVC6 651 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 LGALS13Q9UHV8 139 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 VDAC3Q9Y277 283 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 FIS1Q9Y3D6 152 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 ZNF469Q96JG9 3925 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 NAV3Q8IVL0 2385 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 GJE1A6NN92 205 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 EIF1AYO14602 144 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 PIP5K1BO14986 540 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 SCAMP2O15127 329 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 TMCC2O75069 709 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 SS18L1O75177 396 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 SYNGR4O95473 234 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 PLGP00747 810 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 HMGN2P05204 90 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 CHRNGP07510 517 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 ATP6V1C1P21283 382 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 PSMA4P25789 261 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 CCT3P49368 545 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 SUMO3P55854 103 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 IFFO1Q0D2I5 559 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 MAD2L1Q13257 205 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 ACKR1Q16570 336 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 SMU1Q2TAY7 513 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 PLPPR5Q32ZL2 321 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 XKR7Q5GH72 579 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 CDC73Q6P1J9 531 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 PRSS57Q6UWY2 283 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 C20orf204Q6ZNR8 217 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 BEND4Q6ZU67 534 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 SZRD1Q7Z422 152 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 STK32CQ86UX6 486 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 LRRN4CLQ8ND94 238 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 OR10D3Q8NH80 312 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 OR2V1Q8NHB1 315 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 TCP10LQ8TDR4 215 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 ADAMTS15Q8TE58 950 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 C16orf58Q96GQ5 468 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 ADGRG7Q96K78 797 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 HDHD5Q9BXW7 423 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 ACTRT3Q9BYD9 372 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 GP6Q9HCN6 339 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 KLHL28Q9NXS3 571 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 FAF1Q9UNN5 650 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 ACTL7BQ9Y614 415 aa10.93□□□□□ -0.66
GTF3C1-204ENST00000564664 FLNAP21333 2647 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 ARID1AO14497 2285 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 UQCRHLA0A096LP55 91 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 A0A1W2PPR1 153 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 DUXAA6NLW8 204 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 FAM171A2A8MVW0 826 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 DEFB108AA8MXU0 73 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 SMPD2O60906 423 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 PEX11AO75192 247 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 AQP8O94778 261 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 SNUPNO95149 360 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 LAMP1P11279 417 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 ELK4P28324 431 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 CARD18P57730 90 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 C21orf58P58505 322 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 SIRPAP78324 504 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 NKX6-1P78426 367 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 TP53BP2Q13625 1128 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 POU4F3Q15319 338 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 CTU2Q2VPK5 515 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 KLHL26Q53HC5 615 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 C6orf136Q5SQH8 315 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 CXorf67Q86X51 503 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 LILRA2Q8N149 483 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 OR7A2PQ8NGA2 310 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 CLHC1Q8NHS4 586 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 SFXN5Q8TD22 340 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 JADE3Q92613 823 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 OSTF1Q92882 214 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 ARL8AQ96BM9 186 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
GTF3C1-204ENST00000564664 USB1Q9BQ65 265 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms