RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CCNYQ8ND76 341 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 MYDGFQ969H8 173 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 TMEM237Q96Q45 408 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 TMEM121Q9BTD3 319 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 TBC1D10AQ9BXI6 508 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 CYTL1Q9NRR1 136 aa2.87□□□□□ -1.95
UBR1-205ENST00000564540 SAMD4AQ9UPU9 718 aaKnown RBP2.87□□□□□ -1.95
UBR1-205ENST00000564540 IGHV1OR15-1A0A075B7D0 117 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 OLFM2O95897 454 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 CHRNA1P02708 482 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 PTPN6P29350 595 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 PRDX2P32119 198 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 UGT1A5P35504 534 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 GCKP35557 465 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 CTRLP40313 264 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 NUMBP49757 651 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 NOVA1P51513 510 aaKnown RBP2.86□□□□□ -1.95
UBR1-205ENST00000564540 HSD17B7P56937 341 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 TFDP1Q14186 410 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 ARIH2OSQ8N7S6 290 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 OR52E1Q8NGJ3 308 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 TRUB1Q8WWH5 349 aaKnown RBP2.86□□□□□ -1.95
UBR1-205ENST00000564540 ELMO2Q96JJ3 720 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 MYCBPQ99417 103 aaPredicted RBP2.86□□□□□ -1.95
UBR1-205ENST00000564540 NRTNQ99748 197 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 THAP9Q9H5L6 903 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 GPN2Q9H9Y4 310 aaPredicted RBP2.86□□□□□ -1.95
UBR1-205ENST00000564540 UTP6Q9NYH9 597 aaKnown RBP2.86□□□□□ -1.95
UBR1-205ENST00000564540 EPS15L1Q9UBC2 864 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 MOSPD1Q9UJG1 213 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 DNPEPQ9ULA0 475 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 UBQLN1Q9UMX0 589 aaKnown RBP2.86□□□□□ -1.95
UBR1-205ENST00000564540 CACNG2Q9Y698 323 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 PARD3Q8TEW0 1356 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 PLEKHG1Q9ULL1 1385 aa2.86□□□□□ -1.95
UBR1-205ENST00000564540 H3BTX0 84 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 ZNF264O43296 627 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 TRIM3O75382 744 aaPredicted RBP2.85□□□□□ -1.95
UBR1-205ENST00000564540 NDUFA7O95182 113 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 CXCL10P02778 98 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 GAP43P17677 238 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 HOXD10P28358 340 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 HTR1EP28566 365 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 AKT2P31751 481 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 KIF5BP33176 963 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 BTDP43251 543 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 CDKN3Q16667 212 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 ZNF691Q5VV52 312 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 PVRIGQ6DKI7 326 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 UNC5DQ6UXZ4 953 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 C1orf186Q6ZWK4 172 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 CYS1Q717R9 158 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 HSD11B1LQ7Z5J1 315 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 SKA3Q8IX90 412 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 OR2AP1Q8NGE2 309 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 URGCPQ8TCY9 931 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 TSGA13Q96PP4 275 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 KAT8Q9H7Z6 458 aaKnown RBP2.85□□□□□ -1.95
UBR1-205ENST00000564540 TRPV5Q9NQA5 729 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 HPF1Q9NWY4 346 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 GALPQ9UBC7 116 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 IL20RAQ9UHF4 553 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 RIMS3Q9UJD0 308 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 ZNF223Q9UK11 482 aaPredicted RBP2.85□□□□□ -1.95
UBR1-205ENST00000564540 APPL1Q9UKG1 709 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 IFT52Q9Y366 437 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 STRAPQ9Y3F4 350 aaKnown RBP2.85□□□□□ -1.95
UBR1-205ENST00000564540 GMPPBQ9Y5P6 360 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 WSB1Q9Y6I7 421 aa2.85□□□□□ -1.95
UBR1-205ENST00000564540 ANKRD63C9JTQ0 380 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 K7N7A8 449 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 CPLX1O14810 134 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 SNAI2O43623 268 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 SEC22BO75396 215 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 PNPP00491 289 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 GSTT2P0CG29 244 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 GSTT2BP0CG30 244 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 DESP17661 470 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 XRCC1P18887 633 aaPredicted RBP2.84□□□□□ -1.95
UBR1-205ENST00000564540 AQP1P29972 269 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 NTSP30990 170 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 KIR2DS2P43631 304 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 GNPDA1P46926 289 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 HNRNPA3P51991 378 aaKnown RBP2.84□□□□□ -1.95
UBR1-205ENST00000564540 STARD6P59095 220 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 KRTAP10-10P60014 251 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 FUT7Q11130 342 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 ST3GAL3Q11203 375 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 CBX3Q13185 183 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 GALNT17Q6IS24 598 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 TMEM26Q6ZUK4 368 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 BATF2Q8N1L9 274 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 ZNF786Q8N393 782 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 TMEM252Q8N6L7 170 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 SUMF2Q8NBJ7 301 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 NEK11Q8NG66 645 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 ATP6V0A1Q93050 837 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 CHIAQ9BZP6 476 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 NARFLQ9H6Q4 476 aa2.84□□□□□ -1.95
UBR1-205ENST00000564540 COG4Q9H9E3 785 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms