RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SERINC2Q96SA4 455 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SDF2Q99470 211 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 C1QTNF7Q9BXJ2 289 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 TRPV4Q9HBA0 871 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SPHK1Q9NYA1 384 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 MRPL39Q9NYK5 338 aaKnown RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 NTNG1Q9Y2I2 539 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 GPSM3Q9Y4H4 160 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 CLCA3PQ9Y6N3 262 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 STON1Q9Y6Q2 735 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 DAPL1A0PJW8 107 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 URADA6NGE7 173 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 OR52A4PA6NMU1 304 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 LATO43561 262 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 PLPP2O43688 288 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 KAT7O95251 611 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 NTN1O95631 604 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 IFI6P09912 130 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ZGLP1P0C6A0 271 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SMIM10L1P0DMW3 83 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 HK1P19367 917 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 TLX1P31314 330 aaPredicted RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 SUZ12Q15022 739 aaKnown RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 IDNKQ5T6J7 187 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 PRPF38BQ5VTL8 546 aaKnown RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 PLBD1Q6P4A8 553 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 PAMR1Q6UXH9 720 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 USP53Q70EK8 1073 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 NANOGNBQ7Z5D8 188 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SLC43A2Q8N370 569 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 OR5W2Q8NH69 310 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 FANK1Q8TC84 345 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 TMEM239Q8WW34 195 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SLC22A18Q96BI1 424 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SMIM10Q96HG1 83 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 BEX2Q9BXY8 128 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ZNF350Q9GZX5 532 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 ISG20L2Q9H9L3 353 aaKnown RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 CMC2Q9NRP2 79 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SIDT1Q9NXL6 827 aaKnown RBP12.18□□□□□ -0.46
USB1-207ENST00000563149 FBXL21Q9UKT6 434 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 SATB2Q9UPW6 733 aa12.18□□□□□ -0.46
USB1-207ENST00000563149 TRPM6Q9BX84 2022 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 AK1P00568 194 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 MT-ND5P03915 603 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 SLC35G6P0C7Q6 338 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 PRKCAP17252 672 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 SLC6A1P30531 599 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 ACSL1P33121 698 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 GJA4P35212 333 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 VEGFBP49765 207 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 CTBP2P56545 445 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 CSTF1Q05048 431 aaKnown RBP12.17□□□□□ -0.46
USB1-207ENST00000563149 MRPL28Q13084 256 aaKnown RBP12.17□□□□□ -0.46
USB1-207ENST00000563149 RUNX3Q13761 415 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 EXOSC6Q5RKV6 272 aaKnown RBP12.17□□□□□ -0.46
USB1-207ENST00000563149 SNAP47Q5SQN1 464 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 ZCCHC12Q6PEW1 402 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 VITQ6UXI7 678 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 TMPRSS11FQ6ZWK6 438 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 ZNF767PQ75MW2 155 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 VN1R4Q7Z5H5 301 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 AMIGO1Q86WK6 493 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 TEX19Q8NA77 164 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 SLC2A12Q8TD20 617 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 RFT1Q96AA3 541 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 TM4SF19Q96DZ7 209 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 PAWRQ96IZ0 340 aaKnown RBP12.17□□□□□ -0.46
USB1-207ENST00000563149 NDC1Q9BTX1 674 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 APOOQ9BUR5 198 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 HDHD2Q9H0R4 259 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 KCMF1Q9P0J7 381 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 BAIAP2Q9UQB8 552 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 PLEKHM1Q9Y4G2 1056 aa12.17□□□□□ -0.46
USB1-207ENST00000563149 A0A1W2PP55 124 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 PRR23D1E9PI22 279 aaPredicted RBP12.16□□□□□ -0.46
USB1-207ENST00000563149 HRO43593 1189 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 ZNF780AO75290 641 aaPredicted RBP12.16□□□□□ -0.46
USB1-207ENST00000563149 STX11O75558 287 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 ZNF888P0CJ79 500 aaPredicted RBP12.16□□□□□ -0.46
USB1-207ENST00000563149 PRR23D2P0DMB1 279 aaPredicted RBP12.16□□□□□ -0.46
USB1-207ENST00000563149 NPR2P20594 1047 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 ZNF10P21506 573 aaPredicted RBP12.16□□□□□ -0.46
USB1-207ENST00000563149 PITPNBP48739 271 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 GALK2Q01415 458 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 OR1Q1Q15612 314 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 DUSP5Q16690 384 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 GARNL3Q5VVW2 1013 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 PYHIN1Q6K0P9 492 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 CREB3L2Q70SY1 520 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 OAFQ86UD1 273 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 KCT2Q8NC54 265 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 OR7G1Q8NGA0 311 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 PHOSPHO2Q8TCD6 241 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 C17orf50Q8WW18 174 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 HYLS1Q96M11 299 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 TIMP4Q99727 224 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 THAP7Q9BT49 309 aaPredicted RBP12.16□□□□□ -0.46
USB1-207ENST00000563149 SLC17A9Q9BYT1 436 aa12.16□□□□□ -0.46
USB1-207ENST00000563149 DPH1Q9BZG8 443 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms