RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TIGD3Q6B0B8 471 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 CCDC121Q6ZUS5 278 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 HMGN2P46Q86SG4 172 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 PLCZ1Q86YW0 608 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 CMIPQ8IY22 773 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 ARHGAP24Q8N264 748 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 TMCO5AQ8N6Q1 288 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 OR52P1PQ8NH57 321 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 CDRT15Q96T59 188 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 ARMC7Q9H6L4 198 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 KCNE5Q9UJ90 142 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF443Q9Y2A4 671 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-207ENST00000563109 ATMQ13315 3056 aa17.18■□□□□ 0.34
RAB40C-207ENST00000563109 PIEZO2Q9H5I5 2752 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 CENPVL1A0A0U1RR11 272 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 PRORSD1PA6NEY8 169 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 LRRC3CA6NJW4 275 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 FAM166BA8MTA8 275 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 GYG2O15488 501 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 GMNNO75496 209 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 NID1P14543 1247 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 GDF1P27539 372 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 PPIAP62937 165 aaKnown RBP17.17■□□□□ 0.34
RAB40C-207ENST00000563109 ALDH6A1Q02252 535 aaKnown RBP17.17■□□□□ 0.34
RAB40C-207ENST00000563109 FOXO1Q12778 655 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 CD226Q15762 336 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 ZSWIM7Q19AV6 140 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 EIPR1Q53HC9 387 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF311Q5JNZ3 666 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 CISD2Q8N5K1 135 aaKnown RBP17.17■□□□□ 0.34
RAB40C-207ENST00000563109 DUSP19Q8WTR2 217 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 NTNG2Q96CW9 530 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 BBC3Q96PG8 261 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-207ENST00000563109 TAAR6Q96RI8 345 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 RTN4RQ9BZR6 473 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF703Q9H7S9 590 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-207ENST00000563109 PTGES2Q9H7Z7 377 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 AGPAT4Q9NRZ5 378 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 TAS2R1Q9NYW7 299 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 SEC14L3Q9UDX4 400 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 PRPF19Q9UMS4 504 aaKnown RBP17.17■□□□□ 0.34
RAB40C-207ENST00000563109 USP22Q9UPT9 525 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 C15orf41Q9Y2V0 281 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 GPC6Q9Y625 555 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-207ENST00000563109 NINQ8N4C6 2090 aa17.17■□□□□ 0.34
RAB40C-207ENST00000563109 IGLV3-32A0A0A0MS00 114 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 FAM47E-STBD1D6RA91 191 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF264O43296 627 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 HCRTR2O43614 444 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 GLSO94925 669 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-207ENST00000563109 PABPC4LP0CB38 370 aaKnown RBP17.16■□□□□ 0.34
RAB40C-207ENST00000563109 MSX1P28360 303 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 ADH7P40394 386 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 PCBP3P57721 371 aaKnown RBP17.16■□□□□ 0.34
RAB40C-207ENST00000563109 KCNJ10P78508 379 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 GABPB1Q06547 395 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-207ENST00000563109 TOMM20Q15388 145 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 INPP5JQ15735 1006 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-207ENST00000563109 HYAL4Q2M3T9 481 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 RNF220Q5VTB9 566 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 FNDC7Q5VTL7 733 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 OR5M10Q6IEU7 315 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 VRK2Q86Y07 508 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 ARMC8Q8IUR7 673 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 FAM109AQ8N4B1 249 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 BHLHE22Q8NFJ8 381 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-207ENST00000563109 B4GALNT2Q8NHY0 566 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 SLC26A7Q8TE54 656 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 ZG16BQ96DA0 208 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 SH3YL1Q96HL8 342 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-207ENST00000563109 DKKL1Q9UK85 242 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 SLC13A4Q9UKG4 626 aa17.16■□□□□ 0.34
RAB40C-207ENST00000563109 ADAM10O14672 748 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 EIF4E2O60573 245 aaKnown RBP17.15■□□□□ 0.34
RAB40C-207ENST00000563109 CBR3O75828 277 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 CYP7B1O75881 506 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 IFNA14P01570 189 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 UBTFL6P0CB48 400 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-207ENST00000563109 HSD17B1P14061 328 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 HTR1EP28566 365 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 PRKAR1BP31321 381 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 CCR4P51679 360 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 SUMO3P55854 103 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF117Q03924 483 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 GANABQ14697 944 aaKnown RBP17.15■□□□□ 0.34
RAB40C-207ENST00000563109 LRRC23Q53EV4 343 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-207ENST00000563109 MRPL2Q5T653 305 aaKnown RBP17.15■□□□□ 0.34
RAB40C-207ENST00000563109 ZNF836Q6ZNA1 936 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 CCDC80Q76M96 950 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 TMEM251Q8N6I4 163 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 RNF148Q8N7C7 305 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 FADS6Q8N9I5 356 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 WDSUB1Q8N9V3 476 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 OR2M3Q8NG83 312 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 RASSF5Q8WWW0 418 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 FIG4Q92562 907 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 GNRHR2Q96P88 292 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 BTBD10Q9BSF8 475 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 DSN1Q9H410 356 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 OLAHQ9NV23 265 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms