RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ADCK2Q7Z695 626 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 CTAGE6Q86UF2 777 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 RCOR2Q8IZ40 523 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 ZNF567Q8N184 647 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 KRT222Q8N1A0 295 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 CA13Q8N1Q1 262 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 MUC15Q8N387 334 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 RAB42Q8N4Z0 105 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 NIPA2Q8N8Q9 360 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 KCTD6Q8NC69 237 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 MORN4Q8NDC4 146 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 NUBPLQ8TB37 319 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 UTP15Q8TED0 518 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 ZNF721Q8TF20 911 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 RAPGEF5Q92565 580 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 ZNF597Q96LX8 424 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 RILPQ96NA2 401 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 RNF157Q96PX1 679 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 PKP4Q99569 1192 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 EBNA1BP2Q99848 306 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 DHRS9Q9BPW9 319 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 APOL2Q9BQE5 337 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 PIMREGQ9BSJ6 248 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 GATA5Q9BWX5 397 aaPredicted RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 SUCNR1Q9BXA5 334 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 OR8D2Q9GZM6 311 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 RHBGQ9H310 441 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 CLK4Q9HAZ1 481 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 DDX28Q9NUL7 540 aaKnown RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 DNAJC11Q9NVH1 559 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 NLE1Q9NVX2 485 aaPredicted RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 HIF1ANQ9NWT6 349 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 NKX1-2Q9UD57 310 aaPredicted RBP3.26□□□□□ -1.89
HERC1-211ENST00000560983 RWDD2AQ9UIY3 292 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 MMACHCQ9Y4U1 282 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 PPIAL4AQ9Y536 164 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 HEY1Q9Y5J3 304 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 MMP24Q9Y5R2 645 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 CLCA3PQ9Y6N3 262 aa3.26□□□□□ -1.89
HERC1-211ENST00000560983 LOC105371242A0A075B767 164 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 NPIPA5A0A0B4J1W7 369 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 GOLGA8QA0A0J9YX86 632 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 CCDC162PA2VCL2 907 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 GOLGA8OA6NCC3 632 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 C4orf51C9J302 202 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 NPIPA7E9PJI5 369 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 GOLGA8NF8WBI6 632 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 H0YC42 278 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 H3BNX3 289 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 GOLGA8RI6L899 631 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 CEP104O60308 925 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 AVILO75366 819 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 GCM2O75603 506 aaPredicted RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 CCNDBP1O95273 360 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 STAMBPO95630 424 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 SLC16A8O95907 504 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 IGKV3-11P04433 115 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 APOA4P06727 396 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 NPIPA8P0DM63 369 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 RNH1P13489 461 aaKnown RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 PCMT1P22061 227 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 GIFP27352 417 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 TACR3P29371 465 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 SERPINB3P29508 390 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 TLX1P31314 330 aaPredicted RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 FOXN2P32314 431 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 CASP3P42574 277 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 SUCLG1P53597 346 aaKnown RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 CDH11P55287 796 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 TPD52P55327 224 aaPredicted RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 HSD17B7P56937 341 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 FBXW4P57775 412 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 TAS2R40P59535 323 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 RAB8AP61006 207 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 TSTA3Q13630 321 aaPredicted RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 FHL3Q13643 280 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 RUNX2Q13950 521 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 DOC2AQ14183 400 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 PIGHQ14442 188 aaPredicted RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 FGFBP1Q14512 234 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 PDK2Q15119 407 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 RPS6KA1Q15418 735 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 BCL2A1Q16548 175 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 ANKRD20A4Q4UJ75 823 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 ANKRD20A2Q5SQ80 823 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 ANKRD20A1Q5TYW2 823 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 ANKRD20A3Q5VUR7 823 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 LEG1Q6P5S2 330 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 B3GLCTQ6Y288 498 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 TMEM64Q6YI46 380 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 COLCA1Q6ZS62 124 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 P4HA3Q7Z4N8 544 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 C9orf40Q8IXQ3 194 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 DND1Q8IYX4 353 aaKnown RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 TC2NQ8N9U0 490 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 MFSD9Q8NBP5 474 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 ZNF540Q8NDQ6 660 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 B4GALNT2Q8NHY0 566 aa3.25□□□□□ -1.89
HERC1-211ENST00000560983 FAM110DQ8TAY7 271 aaPredicted RBP3.25□□□□□ -1.89
HERC1-211ENST00000560983 SPPL2AQ8TCT8 520 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms