RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 SLC26A5P58743 744 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 RIPK1Q13546 671 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 SYPL1Q16563 259 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 DUSP5Q16690 384 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.83□□□□□ -0.68
LDLR-212ENST00000560467 DCST2Q5T1A1 773 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 ABHD17BQ5VST6 288 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 FCRLBQ6BAA4 426 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 NCCRP1Q6ZVX7 275 aaPredicted RBP10.83□□□□□ -0.68
LDLR-212ENST00000560467 CCDC80Q76M96 950 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 SHISA5Q8N114 240 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 ZNF527Q8NB42 609 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 C17orf47Q8NEP4 570 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 M1APQ8TC57 530 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 SLC22A8Q8TCC7 542 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 ZNF721Q8TF20 911 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 GIMAP5Q96F15 307 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 RMND5BQ96G75 393 aaPredicted RBP10.83□□□□□ -0.68
LDLR-212ENST00000560467 PYURFQ96I23 114 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 TPD52L3Q96J77 140 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 VSTM2LQ96N03 204 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 COL21A1Q96P44 957 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 BCL2L10Q9HD36 194 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 DCAF13Q9NV06 445 aaKnown RBP10.83□□□□□ -0.68
LDLR-212ENST00000560467 TEKT2Q9UIF3 430 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 PPIEQ9UNP9 301 aaKnown RBP10.83□□□□□ -0.68
LDLR-212ENST00000560467 GPR55Q9Y2T6 319 aaPredicted RBP10.83□□□□□ -0.68
LDLR-212ENST00000560467 FAM32AQ9Y421 112 aaKnown RBP10.83□□□□□ -0.68
LDLR-212ENST00000560467 CLDN16Q9Y5I7 305 aa10.83□□□□□ -0.68
LDLR-212ENST00000560467 TRBV11-1A0A0K0K1C0 115 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 FRG2CA6NGY1 282 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 H3BNH8 94 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 HRKO00198 91 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 GNGT2O14610 69 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 REM1O75628 298 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 H6PDO95479 791 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 IGKV3-11P04433 115 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 DBIP07108 87 aaKnown RBP10.82□□□□□ -0.68
LDLR-212ENST00000560467 GUSBP08236 651 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 IL7RP16871 459 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 ITGA2P17301 1181 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 MAN2A2P49641 1150 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 TMED10P49755 219 aaKnown RBP10.82□□□□□ -0.68
LDLR-212ENST00000560467 CASP6P55212 293 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 SELENOWP63302 87 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 RNF4P78317 190 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 RBPJQ06330 500 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 CCNIQ14094 377 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 FLYWCH1Q4VC44 716 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 EIPR1Q53HC9 387 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 CYBRD1Q53TN4 286 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 ZNF766Q5HY98 468 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 TBCELQ5QJ74 424 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 PLAG1Q6DJT9 500 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 HEPHL1Q6MZM0 1159 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 XKRXQ6PP77 449 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 EIF3MQ7L2H7 374 aaKnown RBP10.82□□□□□ -0.68
LDLR-212ENST00000560467 BEST3Q8N1M1 668 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 SLC5A8Q8N695 610 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 ANKFN1Q8N957 763 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 CHDHQ8NE62 594 aaPredicted RBP10.82□□□□□ -0.68
LDLR-212ENST00000560467 NUBPLQ8TB37 319 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 OIT3Q8WWZ8 545 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 OTUB1Q96FW1 271 aaPredicted RBP10.82□□□□□ -0.68
LDLR-212ENST00000560467 IMMP1LQ96LU5 166 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 BTBD9Q96Q07 612 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 SEPHS2Q99611 448 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 DOHHQ9BU89 302 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 ITPAQ9BY32 194 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 HES7Q9BYE0 225 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 WWTR1Q9GZV5 400 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 MAGIXQ9H6Y5 334 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 EVA1AQ9H8M9 152 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 HHATLQ9HCP6 504 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 S100A14Q9HCY8 104 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 MMP25Q9NPA2 562 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 STMN3Q9NZ72 180 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 SLC9A8Q9Y2E8 581 aa10.82□□□□□ -0.68
LDLR-212ENST00000560467 TCRBV3S1A0A5B6 114 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 A8MUI8 341 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 ZNHIT1O43257 154 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 MGRN1O60291 552 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 ABCB7O75027 752 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 PRKD3O94806 890 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 KCNK2O95069 426 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 C8BP07358 591 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 RAP2AP10114 183 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 ACP2P11117 423 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 ATP6V1B2P21281 511 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 SSTR2P30874 369 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 PIGAP37287 484 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 ERFP50548 548 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 NR0B1P51843 470 aaKnown RBP10.81□□□□□ -0.68
LDLR-212ENST00000560467 ARHGDIAP52565 204 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 SMSP52788 366 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 RPP38P78345 283 aaKnown RBP10.81□□□□□ -0.68
LDLR-212ENST00000560467 PLCXD2Q0VAA5 305 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 EFR3AQ14156 821 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 TESK1Q15569 626 aa10.81□□□□□ -0.68
LDLR-212ENST00000560467 GPR68Q15743 365 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms