RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CAMK2BQ13554 666 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 DAG1Q14118 895 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 DGCR6Q14129 220 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 MICAQ29983 383 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 RSPO4Q2I0M5 234 aaPredicted RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 RFX4Q33E94 735 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 DCST1Q5T197 706 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 FNDC7Q5VTL7 733 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 FAM69BQ5VUD6 431 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 H3F3CQ6NXT2 135 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 JMJD6Q6NYC1 403 aaPredicted RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 TMEM179BQ7Z7N9 219 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 HMGN2P46Q86SG4 172 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 COMTD1Q86VU5 262 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 RBM45Q8IUH3 476 aaKnown RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 LACC1Q8IV20 430 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 MISPQ8IVT2 679 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 GALNT4Q8N4A0 578 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF614Q8N883 585 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 FAM71CQ8NEG0 241 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 OR4D11Q8NGI4 311 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 OR4C3Q8NH37 302 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 GIPC3Q8TF64 312 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 TTC9Q92623 222 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 TMCO6Q96DC7 493 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 ALPK1Q96QP1 1244 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 LMF1Q96S06 567 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 MCHR1Q99705 422 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF559Q9BR84 538 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 MESP1Q9BRJ9 268 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 FNDC11Q9BVV2 318 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 OSBPL11Q9BXB4 747 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 TRIM2Q9C040 744 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 Q9H521 79 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 NMNAT1Q9HAN9 279 aaPredicted RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 EXOSC3Q9NQT5 275 aaKnown RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 RLIMQ9NVW2 624 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 DNAJB12Q9NXW2 375 aaKnown RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 YARS2Q9Y2Z4 477 aaKnown RBP7.92□□□□□ -1.14
TRAF3-209ENST00000560463 TESMINQ9Y4I5 508 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 ORC6Q9Y5N6 252 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 U3KQV3 271 aa7.92□□□□□ -1.14
TRAF3-209ENST00000560463 CENPVL1A0A0U1RR11 272 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 CDC14CA4D256 554 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 ALG1L2C9J202 215 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 J3KTA2 159 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 WWP2O00308 870 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 FAAHO00519 579 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 CDK2AP1O14519 115 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 EI24O14681 340 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 FFAR1O14842 300 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 FADS1O60427 444 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 EIF4E2O60573 245 aaKnown RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 SEMA7AO75326 666 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 CYP7B1O75881 506 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 NADKO95544 446 aaPredicted RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 CSTAP01040 98 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 FBXO45P0C2W1 286 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 UQCRBP14927 111 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 CDH2P19022 906 aaPredicted RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 F8A1P23610 371 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 ELAVL4P26378 380 aaKnown RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 YAP1P46937 504 aaKnown RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF136P52737 540 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 IST1P53990 364 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 RAD23AP54725 363 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 AQP4P55087 323 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 PPP2R2BQ00005 443 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 GANABQ14697 944 aaKnown RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 TRAM2Q15035 370 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 TAF11Q15544 211 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 NPTX1Q15818 432 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 NTRK2Q16620 822 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 EXOC3L2Q2M3D2 409 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 ENTPD8Q5MY95 495 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 OTUD3Q5T2D3 398 aaPredicted RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 TMEM81Q6P7N7 255 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF613Q6PF04 617 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 TBPL2Q6SJ96 375 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 OPN5Q6U736 354 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 PLEKHM3Q6ZWE6 761 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 RPS19BP1Q86WX3 136 aaKnown RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 PRR22Q8IZ63 422 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 LSMEM1Q8N8F7 131 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 OR4C15Q8NGM1 316 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 MAGEE2Q8TD90 523 aaPredicted RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 ADAMTS17Q8TE56 1095 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 ADAMTS16Q8TE57 1224 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 THAP3Q8WTV1 239 aaPredicted RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 NXPE2Q96DL1 559 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 CCNL2Q96S94 520 aaPredicted RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 SECISBP2Q96T21 854 aaKnown RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 WFDC6Q9BQY6 131 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 TBL1XR1Q9BZK7 514 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 GPN2Q9H9Y4 310 aaPredicted RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 TMEM27Q9HBJ8 222 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 ZNF160Q9HCG1 818 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 P4HTMQ9NXG6 502 aa7.91□□□□□ -1.14
TRAF3-209ENST00000560463 SMPD3Q9NY59 655 aaPredicted RBP7.91□□□□□ -1.14
TRAF3-209ENST00000560463 VNN3Q9NY84 501 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms