RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 HOXD1Q9GZZ0 328 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 RNF32Q9H0A6 362 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 PRORYQ9H606 182 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 DEPPQ9NTK1 212 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 GPR83Q9NYM4 423 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 ZNF443Q9Y2A4 671 aaPredicted RBP8.58□□□□□ -1.04
HERC1-206ENST00000559996 IFT52Q9Y366 437 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 CSAG2Q9Y5P2 127 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 IGF2RP11717 2491 aa8.58□□□□□ -1.04
HERC1-206ENST00000559996 CDHR4A6H8M9 788 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 ANKRD33BA6NCL7 494 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 TMEM8BA6NDV4 472 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 TMEM247A6NEH6 219 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 SERINC4A6NH21 518 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 H3BNX3 289 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 ENTPD5O75356 428 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 WISP1O95388 367 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 F10P00742 488 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 DBIP07108 87 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 IL12BP29460 328 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 PRKAR1BP31321 381 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 EVI2BP34910 448 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 PSMD4P55036 377 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 UCNP55089 124 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 TMPRSS3P57727 454 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 VLDLRP98155 873 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 EFR3AQ14156 821 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 NDUFAF6Q330K2 333 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 LRRC23Q53EV4 343 aaPredicted RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 ZNF311Q5JNZ3 666 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 MRPL2Q5T653 305 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 ABHD17BQ5VST6 288 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 RNF220Q5VTB9 566 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 C1orf146Q5VVC0 180 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 BROXQ5VW32 411 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 CBLN3Q6UW01 205 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 IGFL3Q6UXB1 125 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 LRRC69Q6ZNQ3 347 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 ARMC8Q8IUR7 673 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 PEX5LQ8IYB4 626 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 DND1Q8IYX4 353 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 EID3Q8N140 333 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 TMEM156Q8N614 296 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 WDSUB1Q8N9V3 476 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 GOLM1Q8NBJ4 401 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 PHF10Q8WUB8 498 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 OIT3Q8WWZ8 545 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 ASB15Q8WXK1 588 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 CNOT9Q92600 299 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 FAM162AQ96A26 154 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 ARSGQ96EG1 525 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 HSH2DQ96JZ2 352 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 SGCZQ96LD1 299 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 SECISBP2Q96T21 854 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 PINK1Q9BXM7 581 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 HES7Q9BYE0 225 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 AMBRA1Q9C0C7 1298 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 GALNT9Q9HCQ5 603 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 CCM2LQ9NUG4 571 aaPredicted RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 DNAJB12Q9NXW2 375 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 MRTO4Q9UKD2 239 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 ZMIZ1Q9ULJ6 1067 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 PCDHGA9Q9Y5G4 932 aaKnown RBP8.57□□□□□ -1.04
HERC1-206ENST00000559996 CNTRLQ7Z7A1 2325 aa8.57□□□□□ -1.04
HERC1-206ENST00000559996 IGLV3-32A0A0A0MS00 114 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 A0A0G2JMM0 328 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 A0A1W2PPB8 328 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 A0A1W2PRS3 328 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 PINLYPA6NC86 204 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 KIR3DP1A8MWS1 328 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 SYT5O00445 386 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 FFAR1O14842 300 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 SUV39H1O43463 412 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 FRS3O43559 492 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 TRIM3O75382 744 aaPredicted RBP8.56□□□□□ -1.04
HERC1-206ENST00000559996 SERPINB7O75635 380 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 PDE9AO76083 593 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 PRSS23O95084 383 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 ANGPTL1O95841 491 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 THY1P04216 161 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 UMPSP11172 480 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 PRG2P13727 222 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 IL7RP16871 459 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 ATP6V1C1P21283 382 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 MAGEA2P43356 314 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 OR1E2P47887 323 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 CYB561P49447 251 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 CXADRP78310 365 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 FOXO1Q12778 655 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 SKP2Q13309 424 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 SNTA1Q13424 505 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 MTX3Q5HYI7 312 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 SLC22A10Q63ZE4 541 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 BORAQ6PGQ7 559 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 KRT73Q86Y46 540 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 GPALPP1Q8IXQ4 340 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 GATSQ8NAP1 163 aa8.56□□□□□ -1.04
HERC1-206ENST00000559996 OR6T1Q8NGN1 323 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms