RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TUBAL3A6NHL2 446 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 FAM74A7A6NL05 159 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ANXA2P2A6NMY6 339 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 H7C2Y5 167 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 KHDRBS3O75525 346 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 UBXN7O94888 489 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SPDEFO95238 335 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CATP04040 527 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ACP5P13686 325 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ATP1B2P14415 290 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SNRPBP14678 240 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 GNSP15586 552 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 AVPR2P30518 371 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ACVR1BP36896 505 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 MAPK9P45984 424 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 RECQLP46063 649 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 FNTBP49356 437 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ERVK-25P63136 954 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CDK5Q00535 292 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 FLI1Q01543 452 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 OC90Q02509 493 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SP140Q13342 867 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SYPL1Q16563 259 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 FAM74A3Q4VXF1 159 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 HIST2H2AA3Q6FI13 130 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 RGS7BPQ6MZT1 257 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF322Q6U7Q0 402 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PDZD9Q8IXQ8 264 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 OR5D16Q8NGK9 328 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 LINC01599Q8WXQ3 324 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 GCDHQ92947 438 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 YIPF5Q969M3 257 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 EXOSC8Q96B26 276 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 TMEM159Q96B96 161 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 LRRC46Q96FV0 321 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 YIPF4Q9BSR8 244 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SMG9Q9H0W8 520 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 MTG2Q9H4K7 406 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 AUNIPQ9H7T9 357 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ACTR10Q9NZ32 417 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 STOX2Q9P2F5 926 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 NCDNQ9UBB6 729 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 A4GNTQ9UNA3 340 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 RCE1Q9Y256 329 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 DYRK1BQ9Y463 629 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PCDHGA9Q9Y5G4 932 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 R4GN57 208 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 TECTAO75443 2155 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 DAPL1A0PJW8 107 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SERTM1A2A2V5 107 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SOCS6O14544 535 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 FRS3O43559 492 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SLC2A10O95528 541 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 NTN1O95631 604 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 MPC1LP0DKB6 136 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 RPL17P18621 184 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 GSTM3P21266 225 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SERPINA4P29622 427 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PPP2R1BP30154 601 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 KCNJ5P48544 419 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 GAS1P54826 345 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ZXDAP98168 799 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF155Q12901 538 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 IKZF1Q13422 519 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PRSS53Q2L4Q9 553 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ADGRF1Q5T601 910 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SLC22A10Q63ZE4 541 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 OR5M10Q6IEU7 315 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SMARCD3Q6STE5 483 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CRTC1Q6UUV9 634 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 C6orf120Q7Z4R8 191 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SYT9Q86SS6 491 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 LSRQ86X29 649 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 C2orf73Q8N5S3 287 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 BMPERQ8N8U9 685 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 BOLLQ8N9W6 283 aaKnown RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 BVESQ8NE79 360 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PDXPQ96GD0 296 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 UBL7Q96S82 380 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 TREX2Q9BQ50 279 aaPredicted RBP4.74□□□□□ -1.65
HMG20A-204ENST00000558288 DPH7Q9BTV6 452 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 TTTY10Q9BZA0 68 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 ASB6Q9NWX5 421 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 GPR160Q9UJ42 338 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 CBLCQ9ULV8 474 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 PLCL2Q9UPR0 1127 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 SCN10AQ9Y5Y9 1956 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 F5P12259 2224 aa4.74□□□□□ -1.65
HMG20A-204ENST00000558288 NLRC5Q86WI3 1866 aa4.73□□□□□ -1.65
HMG20A-204ENST00000558288 CKAP5Q14008 2032 aa4.73□□□□□ -1.65
HMG20A-204ENST00000558288 A0A0U1RQF3 1178 aa4.73□□□□□ -1.65
HMG20A-204ENST00000558288 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.73□□□□□ -1.65
HMG20A-204ENST00000558288 ZC3H12DA2A288 527 aaKnown RBP4.73□□□□□ -1.65
HMG20A-204ENST00000558288 TMEM202A6NGA9 273 aa4.73□□□□□ -1.65
HMG20A-204ENST00000558288 CPSF4LA6NMK7 179 aaKnown RBP4.73□□□□□ -1.65
HMG20A-204ENST00000558288 C2CD4DB7Z1M9 353 aa4.73□□□□□ -1.65
HMG20A-204ENST00000558288 GFYI3L273 518 aa4.73□□□□□ -1.65
HMG20A-204ENST00000558288 AIPO00170 330 aa4.73□□□□□ -1.65
HMG20A-204ENST00000558288 COCHO43405 550 aa4.73□□□□□ -1.65
HMG20A-204ENST00000558288 SDC3O75056 442 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms