RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 SLC25A35Q3KQZ1 300 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 GLYR1Q49A26 553 aaPredicted RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 NHSL2Q5HYW2 709 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 NXNQ6DKJ4 435 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 OGFOD2Q6N063 350 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 ZNF551Q7Z340 670 aaPredicted RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 CAMKMTQ7Z624 323 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 MARVELD2Q8N4S9 558 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 MEIOBQ8N635 442 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 AMER2Q8N7J2 671 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 ITLN2Q8WWU7 325 aaPredicted RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 WNT2BQ93097 391 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 TESCQ96BS2 214 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 COQ8BQ96D53 544 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 COX4I2Q96KJ9 171 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 EGLN2Q96KS0 407 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 SFXN2Q96NB2 322 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 TM9SF2Q99805 663 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 NUF2Q9BZD4 464 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 RMND5AQ9H871 391 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 AKTIPQ9H8T0 292 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 MEAF6Q9HAF1 191 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 FANCFQ9NPI8 374 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 UBQLN4Q9NRR5 601 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 TAS2R10Q9NYW0 307 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 UBAP1Q9NZ09 502 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 FOXD3Q9UJU5 478 aaPredicted RBP7.91□□□□□ -1.14
USP3-208ENST00000558285 EDARQ9UNE0 448 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 SVILO95425 2214 aa7.91□□□□□ -1.14
USP3-208ENST00000558285 A0A0G2JMM0 328 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PRSS51A0A1B0GVH4 220 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 A0A1W2PPB8 328 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 A0A1W2PRS3 328 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 LRRC3CA6NJW4 275 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 KIR3DP1A8MWS1 328 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 H3BNX3 289 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 DENRO43583 198 aaKnown RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 ZNF354AO60765 605 aaPredicted RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 NKX2-2O95096 273 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 G6PDP11413 515 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PEPDP12955 493 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 ME2P23368 584 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 DPP4P27487 766 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PTPN6P29350 595 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 ZNF41P51814 821 aaPredicted RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 ACTR3P61158 418 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PSG6Q00889 435 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 DUSP2Q05923 314 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PMPCAQ10713 525 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 GNA13Q14344 377 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PTGR1Q14914 329 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.9□□□□□ -1.14
USP3-208ENST00000558285 PDSS1Q5T2R2 415 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 RIPPLY2Q5TAB7 128 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 MFSD12Q6NUT3 480 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 NANOGNBQ7Z5D8 188 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PEX5LQ8IYB4 626 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 OR8J2Q8NGG1 315 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PIWIL2Q8TC59 973 aaKnown RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 CIDECQ96AQ7 238 aaPredicted RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 NMD3Q96D46 503 aaKnown RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 RMND5BQ96G75 393 aaPredicted RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 GNRHR2Q96P88 292 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 DMRTA2Q96SC8 542 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PIGQQ9BRB3 760 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 OR2B2Q9GZK3 357 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PIGUQ9H490 435 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 ZNF696Q9H7X3 374 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 TNFRSF12AQ9NP84 129 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 PAQR5Q9NXK6 330 aaPredicted RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 CAMK2AQ9UQM7 478 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 DTX4Q9Y2E6 619 aa7.9□□□□□ -1.14
USP3-208ENST00000558285 GPC6Q9Y625 555 aaPredicted RBP7.9□□□□□ -1.14
USP3-208ENST00000558285 FLNBO75369 2602 aaKnown RBP7.9□□□□□ -1.15
USP3-208ENST00000558285 BOD1L1Q8NFC6 3051 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 GOLGA8QA0A0J9YX86 632 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 GOLGA8OA6NCC3 632 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 GJE1A6NN92 205 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 GOLGA8NF8WBI6 632 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ZNF701M0R085 212 aaPredicted RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 SCO2O43819 266 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 TRMUO75648 421 aaKnown RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 CLPTM1O96005 669 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 IL6P05231 212 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 FCGR2AP12318 317 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ETS2P15036 469 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 CHI3L1P36222 383 aaPredicted RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 EIF1P41567 113 aaKnown RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 HSPA13P48723 471 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 NR1H2P55055 460 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 DIO3P55073 304 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 GAB1Q13480 694 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 VASNQ6EMK4 673 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 OR2A2Q6IF42 318 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ANKRD26P1Q6NSI1 321 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 CDC73Q6P1J9 531 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 C16orf62Q7Z3J2 963 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 GDF7Q7Z4P5 450 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 FAM83FQ8NEG4 500 aaPredicted RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 OR7A2PQ8NGA2 310 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms