RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 APOOLQ6UXV4 268 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 MAMDC2Q7Z304 686 aaPredicted RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 GRAMD2AQ8IUY3 354 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 CHERPQ8IWX8 916 aaKnown RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 ULK2Q8IYT8 1036 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 ZNF619Q8N2I2 560 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 FADS6Q8N9I5 356 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 CHDHQ8NE62 594 aaPredicted RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 ATP6V1C2Q8NEY4 427 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 TOR1AIP2Q8NFQ8 470 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 ZNF563Q8TA94 476 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 MIPOL1Q8TD10 442 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 ZFP90Q8TF47 636 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 PHF10Q8WUB8 498 aaKnown RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 ASB5Q8WWX0 329 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 AURKBQ96GD4 344 aaPredicted RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 TIMP4Q99727 224 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 RTN4RQ9BZR6 473 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 POLE3Q9NRF9 147 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 THUMPD1Q9NXG2 353 aaKnown RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 CALML5Q9NZT1 146 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 PLEKHB1Q9UF11 243 aaPredicted RBP8.15□□□□□ -1.1
SPG11-207ENST00000558138 CORO2BQ9UQ03 480 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 LIPT1Q9Y234 373 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 NDUFAF1Q9Y375 327 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 PCDHB14Q9Y5E9 798 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 HRH3Q9Y5N1 445 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 DNAJC13O75165 2243 aa8.15□□□□□ -1.1
SPG11-207ENST00000558138 MYO7BQ6PIF6 2116 aa8.15□□□□□ -1.11
SPG11-207ENST00000558138 FREM3P0C091 2139 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 A0A087WZY1 265 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 A0A096LPI6 279 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 A0A1W2PP18 115 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CLEC18AA5D8T8 446 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 SERINC4A6NH21 518 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 SHISA8B8ZZ34 492 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 LINC01387J3KSC0 135 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 HMGN4O00479 90 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 FCMRO60667 390 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CLDN14O95500 239 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 IL2RAP01589 272 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 SNRPB2P08579 225 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 UBTFL6P0CB48 400 aaPredicted RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 ZCCHC18P0CG32 403 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 PEPDP12955 493 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 IL7RP16871 459 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CAPN3P20807 821 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 PPIBP23284 216 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 CHMP24386 653 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CHRNB4P30926 498 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 MRPL19P49406 292 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 P2RX1P51575 399 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CRISP3P54108 245 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 RPS3AP61247 264 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 ADORA2A-AS1P86434 159 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 ZNF117Q03924 483 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CHRNEQ04844 493 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 MAPRE2Q15555 327 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 SYPL1Q16563 259 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 ACSF3Q4G176 576 aaPredicted RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 NHSL2Q5HYW2 709 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 EMC4Q5J8M3 183 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 EXOSC6Q5RKV6 272 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 DCST1Q5T197 706 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 PDSS1Q5T2R2 415 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 GCNT6Q5T4J0 391 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 METTL21CQ5VZV1 264 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 VASNQ6EMK4 673 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 TYW3Q6IPR3 259 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 POMZP3Q6PJE2 187 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 ARSKQ6UWY0 536 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CLEC18BQ6UXF7 455 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 EIF3MQ7L2H7 374 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 CPLX4Q7Z7G2 160 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 DHDDSQ86SQ9 333 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 PEX5LQ8IYB4 626 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 RPRMLQ8N4K4 120 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 ANKFN1Q8N957 763 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CLEC18CQ8NCF0 446 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 RNF138Q8WVD3 245 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 WDR60Q8WVS4 1066 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 ITLN2Q8WWU7 325 aaPredicted RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 STON2Q8WXE9 905 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 GTF2H4Q92759 462 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 ZBTB8AQ96BR9 441 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 WDYHV1Q96HA8 205 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 RNF145Q96MT1 663 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 TTYH2Q9BSA4 534 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 PRRG4Q9BZD6 226 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 NMUR2Q9GZQ4 415 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 ZNF350Q9GZX5 532 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 CCDC134Q9H6E4 229 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 MED17Q9NVC6 651 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 KLHL14Q9P2G3 628 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 SLC35A3Q9Y2D2 325 aa8.14□□□□□ -1.11
SPG11-207ENST00000558138 MRPS18CQ9Y3D5 142 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 DIDO1Q9BTC0 2240 aaKnown RBP8.14□□□□□ -1.11
SPG11-207ENST00000558138 OR2M5A3KFT3 312 aa8.13□□□□□ -1.11
SPG11-207ENST00000558138 HSPB2A8KAH6 182 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms