RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RPSAP08865 295 aaKnown RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 H2AFZP0C0S5 128 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 HIST1H2AGP0C0S8 130 aaPredicted RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 RSPH10BP0C881 870 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 CCDC166P0CW27 439 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 MARCKSP29966 332 aaPredicted RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 BMI1P35226 326 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 MDH1P40925 334 aaKnown RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 HAAOP46952 286 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 KRT6CP48668 564 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 RIPK4P57078 832 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 MYL6P60660 151 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 RPS8P62241 208 aaKnown RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 UBE2HP62256 183 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 GALK2Q01415 458 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 ZNF85Q03923 595 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 LIPEQ05469 1076 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 GFPT1Q06210 699 aaPredicted RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 DDX39BQ13838 428 aaKnown RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 COTL1Q14019 142 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 EIF2B1Q14232 305 aaKnown RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 ZMYND11Q15326 602 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 ZIC1Q15915 447 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 PDPK2PQ6A1A2 396 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 NEK5Q6P3R8 708 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 MIER3Q7Z3K6 550 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 COMTD1Q86VU5 262 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 SLC22A16Q86VW1 577 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 GPR65Q8IYL9 337 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 TCAIMQ8N3R3 496 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 C14orf178Q8N769 122 aaPredicted RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 MLKLQ8NB16 471 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 OR13C2Q8NGS9 318 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 OR9A1PQ8NGU1 263 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 SETD7Q8WTS6 366 aaKnown RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 DDI1Q8WTU0 396 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 HIST1H2ACQ93077 130 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 C19orf60Q96EN9 201 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 KCNK16Q96T55 309 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 LLPHQ9BRT6 129 aaKnown RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 SYTL2Q9HCH5 934 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 NGBQ9NPG2 151 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 AGPAT3Q9NRZ7 376 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 MTRF1LQ9UGC7 380 aaKnown RBP2.33□□□□□ -2.04
SPG11-206ENST00000558093 SNX6Q9UNH7 406 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 GMEB1Q9Y692 573 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 TEX264Q9Y6I9 313 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 COMMD3-BMI1R4GMX3 469 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 PHLPP2Q6ZVD8 1323 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 TNRQ92752 1358 aa2.33□□□□□ -2.04
SPG11-206ENST00000558093 LRRK1Q38SD2 2015 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 IGLV8-61A0A075B6I0 122 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 DNALI1O14645 258 aaPredicted RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 ANGPT2O15123 496 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 CASC3O15234 703 aaKnown RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 TYROBPO43914 113 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 AKAP3O75969 853 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 PGK1P00558 417 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 AK1P00568 194 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 UBTFL6P0CB48 400 aaPredicted RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 RALAP11233 206 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 ZNF18P17022 549 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 PSMB1P20618 241 aaKnown RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 PRKACBP22694 351 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 AHCYP23526 432 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 FCARP24071 287 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 CHMLP26374 656 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 PSMA5P28066 241 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 NF2P35240 595 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 NUP62P37198 522 aaPredicted RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 OR3A4PP47883 348 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 WNT4P56705 351 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 KIAA1024LP59773 190 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 NOP14P78316 857 aaKnown RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 MRPS15P82914 257 aaKnown RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 EIF4EBP2Q13542 120 aaPredicted RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 DPYSQ14117 519 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 CEBPEQ15744 281 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 GLYR1Q49A26 553 aaPredicted RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 EPC2Q52LR7 807 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 SMUG1Q53HV7 270 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 ATAD3BQ5T9A4 648 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 RIPPLY2Q5TAB7 128 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 MEDAGQ5VYS4 303 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 AFTPHQ6ULP2 937 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 ATRAIDQ6UW56 229 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 TOM1L2Q6ZVM7 507 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 C1orf186Q6ZWK4 172 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 SERPINA12Q8IW75 414 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 ZNF679Q8IYX0 411 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 ELMOD2Q8IZ81 293 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 KDM8Q8N371 416 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 RNF10Q8N5U6 811 aaKnown RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 EIF1ADQ8N9N8 165 aaKnown RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 OR52E1Q8NGJ3 308 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 AKR7LQ8NHP1 331 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 CDKL2Q92772 493 aa2.32□□□□□ -2.04
SPG11-206ENST00000558093 BCL2L2Q92843 193 aaPredicted RBP2.32□□□□□ -2.04
SPG11-206ENST00000558093 LRRC39Q96DD0 335 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms