RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 VRK2Q86Y07 508 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 PLCZ1Q86YW0 608 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 MISPQ8IVT2 679 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 WDSUB1Q8N9V3 476 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 OR4K17Q8NGC6 315 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 WDR60Q8WVS4 1066 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 OIT3Q8WWZ8 545 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 NTNG2Q96CW9 530 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 SH3YL1Q96HL8 342 aaPredicted RBP19.41■□□□□ 0.7
CASC4-204ENST00000557945 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.41■□□□□ 0.7
CASC4-204ENST00000557945 B4GALT7Q9UBV7 327 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 ZNF232Q9UNY5 417 aa19.41■□□□□ 0.7
CASC4-204ENST00000557945 EIF4E1BA6NMX2 242 aaKnown RBP19.4■□□□□ 0.7
CASC4-204ENST00000557945 EBAG9O00559 213 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 HCRTR2O43614 444 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 PDE9AO76083 593 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 CSTAP01040 98 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 CRYABP02511 175 aaKnown RBP19.4■□□□□ 0.7
CASC4-204ENST00000557945 PRB1P04280 392 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 ETS2P15036 469 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 ZNF24P17028 368 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 ENDOUP21128 410 aaKnown RBP19.4■□□□□ 0.7
CASC4-204ENST00000557945 RPS4Y1P22090 263 aaKnown RBP19.4■□□□□ 0.7
CASC4-204ENST00000557945 ALDH6A1Q02252 535 aaKnown RBP19.4■□□□□ 0.7
CASC4-204ENST00000557945 LARS2Q15031 903 aaKnown RBP19.4■□□□□ 0.7
CASC4-204ENST00000557945 LIN52Q52LA3 116 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 FNDC7Q5VTL7 733 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 EIF3MQ7L2H7 374 aaKnown RBP19.4■□□□□ 0.7
CASC4-204ENST00000557945 SLC22A16Q86VW1 577 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 SPATA5L1Q9BVQ7 753 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 C1orf21Q9H246 121 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 DSN1Q9H410 356 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 HHATLQ9HCP6 504 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 MED11Q9P086 117 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 RALYQ9UKM9 306 aaKnown RBP19.4■□□□□ 0.7
CASC4-204ENST00000557945 IFT52Q9Y366 437 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 HRH3Q9Y5N1 445 aa19.4■□□□□ 0.7
CASC4-204ENST00000557945 PRORSD1PA6NEY8 169 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 CLDN24A6NM45 220 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 TFECO14948 347 aaPredicted RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 GYG2O15488 501 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 SERPINB7O75635 380 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 CYP7B1O75881 506 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 ATP5HO75947 161 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 GLSO94925 669 aaPredicted RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 UBL4AP11441 157 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 TCN1P20061 433 aaPredicted RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 PCBP3P57721 371 aaKnown RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 KCNJ10P78508 379 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 VEZF1Q14119 521 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 FGFBP1Q14512 234 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 TOMM20Q15388 145 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 NDUFAF6Q330K2 333 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 SOWAHCQ53LP3 525 aaPredicted RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 PRR30Q53SZ7 412 aaPredicted RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 ZNF311Q5JNZ3 666 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 RNFT1Q5M7Z0 435 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 TMEM251Q8N6I4 163 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 TMCO5AQ8N6Q1 288 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 SNRNP40Q96DI7 357 aaKnown RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 TSPAN10Q9H1Z9 355 aaPredicted RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 SEC14L3Q9UDX4 400 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 FBXL2Q9UKC9 423 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 ZNF443Q9Y2A4 671 aaPredicted RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 SLC35A3Q9Y2D2 325 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 CARD8Q9Y2G2 431 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 NTNG1Q9Y2I2 539 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 C15orf41Q9Y2V0 281 aa19.39■□□□□ 0.69
CASC4-204ENST00000557945 GPC6Q9Y625 555 aaPredicted RBP19.39■□□□□ 0.69
CASC4-204ENST00000557945 M0QX08 132 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 THBS1P07996 1170 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 RFPL3SP0C7P2 107 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 PABPC4LP0CB38 370 aaKnown RBP19.38■□□□□ 0.69
CASC4-204ENST00000557945 UBTFL6P0CB48 400 aaPredicted RBP19.38■□□□□ 0.69
CASC4-204ENST00000557945 NID1P14543 1247 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 GDF1P27539 372 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 CCDC121Q6ZUS5 278 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 PATL1Q86TB9 770 aaKnown RBP19.38■□□□□ 0.69
CASC4-204ENST00000557945 ARMC8Q8IUR7 673 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 FAM156AQ8NDB6 213 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 TNIP2Q8NFZ5 429 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 OR2M3Q8NG83 312 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 B4GALNT2Q8NHY0 566 aa19.38■□□□□ 0.69
CASC4-204ENST00000557945 SLC7A6OSQ96CW6 309 aaPredicted RBP19.38■□□□□ 0.69
CASC4-204ENST00000557945 NPIPA5E9PKD4 350 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 ZNF264O43296 627 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 OIP5O43482 229 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 GCM2O75603 506 aaPredicted RBP19.37■□□□□ 0.69
CASC4-204ENST00000557945 CBR3O75828 277 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 OPN1SWP03999 348 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 ADH7P40394 386 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 MAGEA5P43359 124 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 MLLT10P55197 1068 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 ZNF117Q03924 483 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 HYAL4Q2M3T9 481 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 DNAL1Q4LDG9 190 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 MRPL2Q5T653 305 aaKnown RBP19.37■□□□□ 0.69
CASC4-204ENST00000557945 ZNF836Q6ZNA1 936 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 CMIPQ8IY22 773 aa19.37■□□□□ 0.69
CASC4-204ENST00000557945 SLC26A7Q8TE54 656 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms