RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ZNF141Q15928 474 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 CD163Q86VB7 1156 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 MISPQ8IVT2 679 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 TMCO5AQ8N6Q1 288 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 NEIL3Q8TAT5 605 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 SLC38A5Q8WUX1 472 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 RCN3Q96D15 328 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 ARSGQ96EG1 525 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 TMEM19Q96HH6 336 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 ANKRD27Q96NW4 1050 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 THUMPD3Q9BV44 507 aaKnown RBP13.03□□□□□ -0.32
USP3-205ENST00000557884 OR2B2Q9GZK3 357 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 SAP130Q9H0E3 1048 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 A4GALTQ9NPC4 353 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 CARD8Q9Y2G2 431 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 EXPH5Q8NEV8 1989 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 SVILO95425 2214 aa13.03□□□□□ -0.32
USP3-205ENST00000557884 A0A1B0GVC2 190 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 CLDN24A6NM45 220 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 SHISA8B8ZZ34 492 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 FXYD1O00168 92 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 AQP7O14520 342 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 SUSD5O60279 629 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 CYP7B1O75881 506 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 GUSBP08236 651 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 TFPTP0C1Z6 253 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 UBL4AP11441 157 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 HK1P19367 917 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 DSCR4P56555 118 aaPredicted RBP13.02□□□□□ -0.33
USP3-205ENST00000557884 ZNF117Q03924 483 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 ZNF630Q2M218 657 aaPredicted RBP13.02□□□□□ -0.33
USP3-205ENST00000557884 COQ5Q5HYK3 327 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 CBLN3Q6UW01 205 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 ARSKQ6UWY0 536 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 C3P1Q6ZMU1 363 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 PCYOX1LQ8NBM8 494 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 OR5M1Q8NGP8 315 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 B4GALNT2Q8NHY0 566 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 NFKBIDQ8NI38 313 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 RP9Q8TA86 221 aaKnown RBP13.02□□□□□ -0.33
USP3-205ENST00000557884 FAM57AQ8TBR7 257 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 LRRC58Q96CX6 371 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 C1GALT1C1Q96EU7 318 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 SFXN2Q96NB2 322 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 PTGES2Q9H7Z7 377 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 THUMPD1Q9NXG2 353 aaKnown RBP13.02□□□□□ -0.33
USP3-205ENST00000557884 ACAD8Q9UKU7 415 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 CORO2BQ9UQ03 480 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 VDAC3Q9Y277 283 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 ZNF835Q9Y2P0 537 aa13.02□□□□□ -0.33
USP3-205ENST00000557884 C5orf58C9J3I9 102 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 PRRG2O14669 202 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 AIM2O14862 343 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 LRRTM2O43300 516 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 ZIC3O60481 467 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 BCAS1O75363 584 aaPredicted RBP13.01□□□□□ -0.33
USP3-205ENST00000557884 NUDT14O95848 222 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 FAM107AO95990 144 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 CSTAP01040 98 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 STSP08842 583 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 ARAFP10398 606 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 BMP2P12643 396 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 MSX1P28360 303 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 CCR4P51679 360 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 CRISP3P54108 245 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 CASP6P55212 293 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 CYP51A1Q16850 503 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 DCST1Q5T197 706 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 RAET1LQ5VY80 246 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 Q6ZPB1 254 aaPredicted RBP13.01□□□□□ -0.33
USP3-205ENST00000557884 EIF3MQ7L2H7 374 aaKnown RBP13.01□□□□□ -0.33
USP3-205ENST00000557884 MTERF4Q7Z6M4 381 aaKnown RBP13.01□□□□□ -0.33
USP3-205ENST00000557884 FJX1Q86VR8 437 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 IFNEQ86WN2 208 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 SARAFQ96BY9 339 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 DTNBP1Q96EV8 351 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 TREX2Q9BQ50 279 aaPredicted RBP13.01□□□□□ -0.33
USP3-205ENST00000557884 PIF1Q9H611 641 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 MTHFD2LQ9H903 347 aaPredicted RBP13.01□□□□□ -0.33
USP3-205ENST00000557884 PNPLA3Q9NST1 481 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 ALKBH4Q9NXW9 302 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 CALML5Q9NZT1 146 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 L3MBTL1Q9Y468 752 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 GMEB1Q9Y692 573 aa13.01□□□□□ -0.33
USP3-205ENST00000557884 NINQ8N4C6 2090 aa13□□□□□ -0.33
USP3-205ENST00000557884 EML6Q6ZMW3 1958 aa13□□□□□ -0.33
USP3-205ENST00000557884 OR14I1A6ND48 311 aa13□□□□□ -0.33
USP3-205ENST00000557884 AGAP5A6NIR3 686 aa13□□□□□ -0.33
USP3-205ENST00000557884 FAM47E-STBD1D6RA91 191 aa13□□□□□ -0.33
USP3-205ENST00000557884 ZNF264O43296 627 aa13□□□□□ -0.33
USP3-205ENST00000557884 SEMA7AO75326 666 aa13□□□□□ -0.33
USP3-205ENST00000557884 UBTFL6P0CB48 400 aaPredicted RBP13□□□□□ -0.33
USP3-205ENST00000557884 BMP7P18075 431 aa13□□□□□ -0.33
USP3-205ENST00000557884 GPX2P18283 190 aa13□□□□□ -0.33
USP3-205ENST00000557884 GCKP35557 465 aa13□□□□□ -0.33
USP3-205ENST00000557884 CA7P43166 264 aa13□□□□□ -0.33
USP3-205ENST00000557884 CDK6Q00534 326 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms