RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 LILRB4Q8NHJ6 448 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 AENQ8WTP8 325 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 SORCS1Q8WY21 1168 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 BADQ92934 168 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 BIRC7Q96CA5 298 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 NUS1Q96E22 293 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 TIMD4Q96H15 378 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 IL17FQ96PD4 163 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 TMEM121Q9BTD3 319 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 SPATA16Q9BXB7 569 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 ANKRD60Q9BZ19 345 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 IL22Q9GZX6 179 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 MRPS30Q9NP92 439 aaKnown RBP3.26□□□□□ -1.89
TDP1-217ENST00000557782 SIX2Q9NPC8 291 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 ZDHHC18Q9NUE0 388 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 BFARQ9NZS9 450 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 STARD10Q9Y365 291 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 PEX16Q9Y5Y5 336 aa3.26□□□□□ -1.89
TDP1-217ENST00000557782 ATP10AO60312 1499 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 A0A1W2PPE3 182 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 GABRR3A8MPY1 467 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 K7ERQ8 282 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 HIP1O00291 1037 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 WWP2O00308 870 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 PRKAB2O43741 272 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 EFNA2O43921 213 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 RAMP3O60896 148 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 KRT36O76013 467 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 OR2F2O95006 317 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 AP2A1O95782 977 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 CLPTM1O96005 669 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 SP1P08047 785 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 IGFBP1P08833 259 aaPredicted RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 ACAA1P09110 424 aaPredicted RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 ZNF24P17028 368 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 SRMP19623 302 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 PTNP21246 168 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 PPP2R1BP30154 601 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 HMOX2P30519 316 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 RRM2P31350 389 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 RPL4P36578 427 aaKnown RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 GNPDA1P46926 289 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 NDST2P52849 883 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 CRYBA2P53672 197 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 DAOAP59103 153 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 CSNK2BP67870 215 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 RIPPLY1Q0D2K3 151 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 KLRB1Q12918 225 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 KLF9Q13886 244 aaPredicted RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 GK3PQ14409 553 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 TMEM187Q14656 261 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 SLC15A2Q16348 729 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 ECSCRQ19T08 205 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 SLC5A12Q1EHB4 618 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 SLC25A52Q3SY17 297 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 WDR38Q5JTN6 314 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 DCST2Q5T1A1 773 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 SLC8B1Q6J4K2 584 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 TMEM220Q6QAJ8 160 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 RBM23Q86U06 439 aaKnown RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 TRIM69Q86WT6 500 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 ERI1Q8IV48 349 aaKnown RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 TCAIMQ8N3R3 496 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 FGFRL1Q8N441 504 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 CSGALNACT2Q8N6G5 542 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 IQCF1Q8N6M8 205 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 SDR9C7Q8NEX9 313 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 OR4K14Q8NGD5 310 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 OR5AP2Q8NGF4 316 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 OR1L6Q8NGR2 347 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 MAGEE2Q8TD90 523 aaPredicted RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 SMAP2Q8WU79 429 aaPredicted RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 PCNPQ8WW12 178 aaKnown RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 TM9SF4Q92544 642 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 NRBF2Q96F24 287 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 HMCESQ96FZ2 354 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 PPP1R16AQ96I34 528 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 SERAC1Q96JX3 654 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 ALKBH3Q96Q83 286 aaPredicted RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 CLCC1Q96S66 551 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 NIPSNAP3BQ9BS92 247 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 HOXD1Q9GZZ0 328 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 ANKRD19PQ9H560 264 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 ATP13A3Q9H7F0 1226 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 TAAR2Q9P1P5 351 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 OARD1Q9Y530 152 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 GMEB1Q9Y692 573 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 BZW2Q9Y6E2 419 aaKnown RBP3.25□□□□□ -1.89
TDP1-217ENST00000557782 MYH15Q9Y2K3 1946 aa3.25□□□□□ -1.89
TDP1-217ENST00000557782 CENPJQ9HC77 1338 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 A0A0G2JLW4 131 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 TRBV7-9A0A0J9YWB2 115 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 GLTPD2A6NH11 291 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 CD8B2A6NJW9 211 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 RNF212BA8MTL3 300 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 POLR1CO15160 346 aaPredicted RBP3.24□□□□□ -1.89
TDP1-217ENST00000557782 RS1O15537 224 aa3.24□□□□□ -1.89
TDP1-217ENST00000557782 RAMP1O60894 148 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms