RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 C5orf58C9J3I9 102 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 FAM47E-STBD1D6RA91 191 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 GTPBP1O00178 669 aaKnown RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ADAM10O14672 748 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 GNB5O14775 395 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF264O43296 627 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 SCO2O43819 266 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 FCMRO60667 390 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 UGT2B17O75795 530 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 THBS1P07996 1170 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 RFPL3SP0C7P2 107 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ARAFP10398 606 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ETFAP13804 333 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 RPS4Y1P22090 263 aaKnown RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 SLC6A2P23975 617 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 FKBP2P26885 142 aaKnown RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 DPP4P27487 766 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ADH6P28332 368 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 PTGS2P35354 604 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 P2RX1P51575 399 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 KCNJ10P78508 379 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ART3Q13508 389 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 LARS2Q15031 903 aaKnown RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 BCL2A1Q16548 175 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 GTDC1Q4AE62 458 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 GCNT6Q5T4J0 391 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 INTS11Q5TA45 600 aaKnown RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 REP15Q6BDI9 236 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 DESI1Q6ICB0 168 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 NANOGP8Q6NSW7 305 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ERICH5Q6P6B1 374 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ENPP6Q6UWR7 440 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 APOOLQ6UXV4 268 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 NET1Q7Z628 596 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 MARCH3Q86UD3 253 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 KRT73Q86Y46 540 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF440Q8IYI8 595 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 C11orf65Q8NCR3 313 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 OR2M3Q8NG83 312 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 B4GALNT2Q8NHY0 566 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 BBS10Q8TAM1 723 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 PNPT1Q8TCS8 783 aaKnown RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ZBTB8AQ96BR9 441 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ARSGQ96EG1 525 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 OTUB1Q96FW1 271 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 AURKBQ96GD4 344 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ZNF607Q96SK3 696 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 TREX2Q9BQ50 279 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 ECSITQ9BQ95 431 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 PIGQQ9BRB3 760 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 CPPED1Q9BRF8 314 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-234ENST00000557703 LAT2Q9GZY6 243 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 NANOGQ9H9S0 305 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 NDE1Q9NXR1 346 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 TAS2R10Q9NYW0 307 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 MKLN1Q9UL63 735 aa12.46□□□□□ -0.41
SHMT2-234ENST00000557703 SPENQ96T58 3664 aaKnown RBP12.45□□□□□ -0.42
SHMT2-234ENST00000557703 UBR5O95071 2799 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-234ENST00000557703 PRORSD1PA6NEY8 169 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 SLC19A2O60779 497 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 DNAJA2O60884 412 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 SERPINB7O75635 380 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 TRAPPC6AO75865 159 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 PDE9AO76083 593 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 CSTAP01040 98 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 UBL4AP11441 157 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 NID1P14543 1247 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 GABRA1P14867 456 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 ABOP16442 354 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 IL7RP16871 459 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 ZNF17P17021 662 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 RFC3P40938 356 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 SLC6A8P48029 635 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 MAP2K6P52564 334 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 CDK6Q00534 326 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 CHRNEQ04844 493 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 FUT5Q11128 374 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 FGFBP1Q14512 234 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 KRT72Q14CN4 511 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 IGFBP7Q16270 282 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 SYPL1Q16563 259 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 LIN52Q52LA3 116 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 COLEC12Q5KU26 742 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 PDZK1Q5T2W1 519 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 WLSQ5T9L3 541 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 ZAR1Q86SH2 424 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 GRAMD2AQ8IUY3 354 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 HIPK4Q8NE63 616 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 FAM71CQ8NEG0 241 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 FAM83FQ8NEG4 500 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-234ENST00000557703 FAM57AQ8TBR7 257 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 PHOSPHO1Q8TCT1 267 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 RELTQ969Z4 430 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 C1GALT1C1Q96EU7 318 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 DEFB127Q9H1M4 99 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 DSN1Q9H410 356 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 EXO5Q9H790 373 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 DKKL1Q9UK85 242 aa12.45□□□□□ -0.42
SHMT2-234ENST00000557703 FREM3P0C091 2139 aa12.44□□□□□ -0.42
SHMT2-234ENST00000557703 PRAMEF27A3QJZ7 478 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms