RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 REG4Q9BYZ8 158 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 C12orf65Q9H3J6 166 aaKnown RBP12.55□□□□□ -0.4
SLIRP-210ENST00000557431 SIRT5Q9NXA8 310 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 MRTO4Q9UKD2 239 aaKnown RBP12.55□□□□□ -0.4
SLIRP-210ENST00000557431 EMCNQ9ULC0 261 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 GRID1Q9ULK0 1009 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 FIS1Q9Y3D6 152 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 RNF115Q9Y4L5 304 aa12.55□□□□□ -0.4
SLIRP-210ENST00000557431 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 RNF212BA8MTL3 300 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 ALG1L2C9J202 215 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 PDPK1O15530 556 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 EFNA2O43921 213 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 NKX2-2O95096 273 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 TUBBP07437 444 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 DANCRP0C864 163 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 PRPS2P11908 318 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 ZNF17P17021 662 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 EDNRAP25101 427 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 PRIM2P49643 509 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 RAC1P63000 192 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 SLC29A2Q14542 456 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 TAB1Q15750 504 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 ZNF239Q16600 458 aaKnown RBP12.54□□□□□ -0.4
SLIRP-210ENST00000557431 DUSP5Q16690 384 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 NDUFAF6Q330K2 333 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 GLE1Q53GS7 698 aaKnown RBP12.54□□□□□ -0.4
SLIRP-210ENST00000557431 CLEC6AQ6EIG7 209 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 NOXRED1Q6NXP6 359 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 TFAP2EQ6VUC0 442 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 TUSC5Q8IXB3 177 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 SLC16A11Q8NCK7 471 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 MNS1Q8NEH6 495 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 ATP6V1C2Q8NEY4 427 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 NUP43Q8NFH3 380 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 KIF18AQ8NI77 898 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 OSTF1Q92882 214 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 FBXW5Q969U6 566 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 GIMAP5Q96F15 307 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 KLHL15Q96M94 604 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 TACO1Q9BSH4 297 aaKnown RBP12.54□□□□□ -0.4
SLIRP-210ENST00000557431 SLCO5A1Q9H2Y9 848 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 C3orf14Q9HBI5 128 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 YAE1D1Q9NRH1 226 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 GIN1Q9NXP7 522 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 TBK1Q9UHD2 729 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 NFU1Q9UMS0 254 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 LIPT1Q9Y234 373 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 GPR52Q9Y2T5 361 aa12.54□□□□□ -0.4
SLIRP-210ENST00000557431 SERTM1A2A2V5 107 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 G3V2L1 256 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 OVOL3O00110 214 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 ADAM11O75078 769 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 KCNK2O95069 426 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 PYGBP11216 843 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 PSMB1P20618 241 aaKnown RBP12.53□□□□□ -0.4
SLIRP-210ENST00000557431 MAP3K8P41279 467 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 ZNF41P51814 821 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-210ENST00000557431 NCMAPQ5T1S8 102 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 SEZ6L2Q6UXD5 910 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 TIFABQ6ZNK6 161 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 STK32CQ86UX6 486 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 SLC22A9Q8IVM8 553 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 NANOS1Q8WY41 292 aaKnown RBP12.53□□□□□ -0.4
SLIRP-210ENST00000557431 JADE3Q92613 823 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 GTPBP3Q969Y2 492 aaKnown RBP12.53□□□□□ -0.4
SLIRP-210ENST00000557431 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 TSSK3Q96PN8 268 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 TAS2R7Q9NYW3 318 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 PRSS50Q9UI38 385 aa12.53□□□□□ -0.4
SLIRP-210ENST00000557431 A0A1W2PP18 115 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 A0A1W2PPM1 405 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 C9JVG2 144 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 ADAMDEC1O15204 470 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 GPRIN2O60269 458 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 RAMP1O60894 148 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 SEC22BO75396 215 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 CRCPO75575 148 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 SLITRK5O94991 958 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 ADAP00813 363 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 CD3EP07766 207 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 IL32P24001 234 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 GSTM5P46439 218 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 OCRLQ01968 901 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 ZNF117Q03924 483 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 BSPH1Q075Z2 132 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 TOMM34Q15785 309 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-210ENST00000557431 PGGHGQ32M88 737 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 TMEM201Q5SNT2 666 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 CPTPQ5TA50 214 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 HEPHL1Q6MZM0 1159 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 CBLN3Q6UW01 205 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 ESPNLQ6ZVH7 1005 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 LILRA2Q8N149 483 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 GABRG1Q8N1C3 465 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 BANPQ8N9N5 519 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 OR2T11Q8NH01 316 aa12.52□□□□□ -0.41
SLIRP-210ENST00000557431 RNF128Q8TEB7 428 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms