RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 KLHL4Q9C0H6 718 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 L2HGDHQ9H9P8 463 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 SIRT3Q9NTG7 399 aaPredicted RBP20.28■□□□□ 0.84
ACTN1-220ENST00000556433 MED17Q9NVC6 651 aa20.28■□□□□ 0.84
ACTN1-220ENST00000556433 UQCRHLA0A096LP55 91 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 SLU7O95391 586 aaKnown RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 PLGP00747 810 aaPredicted RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 HMGN2P05204 90 aaKnown RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 LAMP1P11279 417 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 CCKARP32238 428 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 RPL3P39023 403 aaKnown RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 ZNF41P51814 821 aaPredicted RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 RAC1P63000 192 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 POU6F2P78424 691 aaPredicted RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 NKX6-1P78426 367 aaPredicted RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 LASP1Q14847 261 aaKnown RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 EXOC3L2Q2M3D2 409 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 EXOSC6Q5RKV6 272 aaKnown RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 ANKRD34AQ69YU3 496 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 MISPQ8IVT2 679 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 TCP10LQ8TDR4 215 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 BTBD2Q9BX70 525 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 PAQR5Q9NXK6 330 aaPredicted RBP20.27■□□□□ 0.84
ACTN1-220ENST00000556433 CLEC4AQ9UMR7 237 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 EMC9Q9Y3B6 208 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 SNX8Q9Y5X2 465 aa20.27■□□□□ 0.84
ACTN1-220ENST00000556433 C7orf72A4D263 438 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 SCAMP2O15127 329 aaKnown RBP20.26■□□□□ 0.83
ACTN1-220ENST00000556433 CXCL13O43927 109 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 SYNGR4O95473 234 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 HSPA4LO95757 839 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 PSMA4P25789 261 aaKnown RBP20.26■□□□□ 0.83
ACTN1-220ENST00000556433 CTBP2P56545 445 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 IFFO1Q0D2I5 559 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 PLPPR5Q32ZL2 321 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 KRTAP21-3Q3LHN1 58 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 ZCCHC23Q6ZST2 131 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 CXorf67Q86X51 503 aaPredicted RBP20.26■□□□□ 0.83
ACTN1-220ENST00000556433 B4GALNT2Q8NHY0 566 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 CDS1Q92903 461 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 GMPPAQ96IJ6 420 aaPredicted RBP20.26■□□□□ 0.83
ACTN1-220ENST00000556433 ADGRG7Q96K78 797 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 RNF145Q96MT1 663 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 PIGUQ9H490 435 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 PLSCR4Q9NRQ2 329 aa20.26■□□□□ 0.83
ACTN1-220ENST00000556433 MCTS1Q9ULC4 181 aaKnown RBP20.26■□□□□ 0.83
ACTN1-220ENST00000556433 A0A1W2PQD3 144 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 ADAMDEC1O15204 470 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 NUDT17P0C025 328 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 CCT3P49368 545 aaKnown RBP20.25■□□□□ 0.83
ACTN1-220ENST00000556433 CD226Q15762 336 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 CTU2Q2VPK5 515 aaKnown RBP20.25■□□□□ 0.83
ACTN1-220ENST00000556433 ATP6AP1LQ52LC2 224 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 XKR7Q5GH72 579 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 SHEQ5VZ18 495 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 OR6K3Q8NGY3 331 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 OR2V1Q8NHB1 315 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 POC1BQ8TC44 478 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 OR5P2Q8WZ92 322 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 C3orf30Q96M34 536 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 STACQ99469 402 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 KLHDC3Q9BQ90 382 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 C1orf50Q9BV19 199 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 TMEM185BQ9H7F4 350 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 ANKZF1Q9H8Y5 726 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 DUSP22Q9NRW4 184 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 LGALS13Q9UHV8 139 aa20.25■□□□□ 0.83
ACTN1-220ENST00000556433 TNFSF11O14788 317 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 HOXB4P17483 251 aaPredicted RBP20.24■□□□□ 0.83
ACTN1-220ENST00000556433 IL11P20809 199 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 ATP6V1C1P21283 382 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 ME2P23368 584 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 SERPINB5P36952 375 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 PTGR1Q14914 329 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 ACKR1Q16570 336 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 C6orf136Q5SQH8 315 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 PDSS1Q5T2R2 415 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 IL23RQ5VWK5 629 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 HBMQ6B0K9 141 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 CDC73Q6P1J9 531 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 C22orf34Q6ZV56 151 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 ESPNLQ6ZVH7 1005 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 KRTAP1-3Q8IUG1 177 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 ADAMTS15Q8TE58 950 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 NUDT8Q8WV74 236 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 PIGTQ969N2 578 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 UBTD1Q9HAC8 227 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 ATAD3AQ9NVI7 634 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 GIN1Q9NXP7 522 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 ZDHHC2Q9UIJ5 367 aa20.24■□□□□ 0.83
ACTN1-220ENST00000556433 FLNAP21333 2647 aaKnown RBP20.23■□□□□ 0.83
ACTN1-220ENST00000556433 NAV3Q8IVL0 2385 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 A0A0J9YW62 118 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 ARHGEF9O43307 516 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 SMPD2O60906 423 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 SS18L1O75177 396 aaPredicted RBP20.23■□□□□ 0.83
ACTN1-220ENST00000556433 LYPLA1O75608 230 aaPredicted RBP20.23■□□□□ 0.83
ACTN1-220ENST00000556433 ARRB2P32121 409 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 TP53BP2Q13625 1128 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 LSM12Q3MHD2 195 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms