RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 NTMQ9P121 344 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 ADAM21Q9UKJ8 722 aa11.89□□□□□ -0.51
TGFB3-204ENST00000556285 CHD3Q12873 2000 aaKnown RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 TTC36A6NLP5 189 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 COPEO14579 308 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 LSM1O15116 133 aaKnown RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 EFNA2O43921 213 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 TBX19O60806 448 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 SS18L1O75177 396 aaPredicted RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 NTN1O95631 604 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 CHRNGP07510 517 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 KRT4P19013 534 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 FPR1P21462 350 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 PCSK6P29122 969 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 CCT5P48643 541 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 NAA20P61599 178 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 OCRLQ01968 901 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 GALNTL6Q49A17 601 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 EXOSC6Q5RKV6 272 aaKnown RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 KANK2Q63ZY3 851 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 WDR75Q8IWA0 830 aaKnown RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 GTPBP8Q8N3Z3 284 aaPredicted RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 OR6K3Q8NGY3 331 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 CEP70Q8NHQ1 597 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 UBLCP1Q8WVY7 318 aaPredicted RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 ZBED6CLQ96FA7 236 aaPredicted RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 ZNF764Q96H86 408 aaPredicted RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 METTL2AQ96IZ6 378 aaKnown RBP11.88□□□□□ -0.51
TGFB3-204ENST00000556285 MS4A4EQ96PG1 132 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 EMC9Q9Y3B6 208 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 DNAJC15Q9Y5T4 150 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 JMJD1CQ15652 2540 aa11.88□□□□□ -0.51
TGFB3-204ENST00000556285 USF3Q68DE3 2245 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 CSPG4Q6UVK1 2322 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 NUP214P35658 2090 aaPredicted RBP11.87□□□□□ -0.51
TGFB3-204ENST00000556285 FREM1Q5H8C1 2179 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 A0A087WZY1 265 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 NPIPA5A0A0B4J1W7 369 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 NPIPA7E9PJI5 369 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 ADAMDEC1O15204 470 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 PLGP00747 810 aaPredicted RBP11.87□□□□□ -0.51
TGFB3-204ENST00000556285 NGFRP08138 427 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 NPIPA8P0DM63 369 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 FCGR2AP12318 317 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 BCKDHAP12694 445 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 ZNF17P17021 662 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 PRIM2P49643 509 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 CTBP2P56545 445 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 FGFBP1Q14512 234 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 UGT3A2Q3SY77 523 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 VPS26BQ4G0F5 336 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 CPTPQ5TA50 214 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 TDRPQ86YL5 185 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 OR7A2PQ8NGA2 310 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 OR2V1Q8NHB1 315 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 ZFP28Q8NHY6 868 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 IGFBPL1Q8WX77 278 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 ROBO4Q8WZ75 1007 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 JADE3Q92613 823 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 CDS1Q92903 461 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 ZNF524Q96C55 264 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 FAM120BQ96EK7 910 aaKnown RBP11.87□□□□□ -0.51
TGFB3-204ENST00000556285 GMPPAQ96IJ6 420 aaPredicted RBP11.87□□□□□ -0.51
TGFB3-204ENST00000556285 MECRQ9BV79 373 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
TGFB3-204ENST00000556285 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 ACSS1Q9NUB1 689 aaPredicted RBP11.87□□□□□ -0.51
TGFB3-204ENST00000556285 GIN1Q9NXP7 522 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 KCNE3Q9Y6H6 103 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
TGFB3-204ENST00000556285 C7orf72A4D263 438 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 INAFM1C9JVW0 142 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 PIP5K1BO14986 540 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 TRIM13O60858 407 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 SYNGR4O95473 234 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 HMGN2P05204 90 aaKnown RBP11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ALOX5P09917 674 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 LINGO3P0C6S8 592 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 LAMP1P11279 417 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 NID1P14543 1247 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ALDH3A1P30838 453 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ARRB2P32121 409 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 PTH2RP49190 550 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ZNF41P51814 821 aaPredicted RBP11.86□□□□□ -0.51
TGFB3-204ENST00000556285 RAC1P63000 192 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ZNF117Q03924 483 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ZNF844Q08AG5 666 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 FOXF1Q12946 379 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 TSC22D1Q15714 1073 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 NDUFAF6Q330K2 333 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 HBMQ6B0K9 141 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ALKBH2Q6NS38 261 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 CBLN3Q6UW01 205 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 C20orf204Q6ZNR8 217 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 DDIASQ8IXT1 998 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 COX18Q8N8Q8 333 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 OR6Y1Q8NGX8 325 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 OR2W6PQ8NHA6 318 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms