RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 RNF215Q9Y6U7 377 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 U3KQV3 271 aa6.34□□□□□ -1.39
SLIRP-204ENST00000555890 ANK2Q01484 3957 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 COL27A1Q8IZC6 1860 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 A0A087WV62 115 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 A0A1B0GTQ1 180 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 DPPA5A6NC42 116 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF860A6NHJ4 632 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 H3BNH8 94 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF561-AS1K7EIQ3 104 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 SGK494L7N484 410 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 TNFRSF11BO00300 401 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 CLDN4O14493 209 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 YKT6O15498 198 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 CHST10O43529 356 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 B4GALT2O60909 372 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 UGT2B11O75310 529 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 DNAJB5O75953 348 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 SOX30O94993 753 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 DIRAS1O95057 198 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 MFN2O95140 757 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 NSA2O95478 260 aaKnown RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 CLPTM1O96005 669 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ATP1B1P05026 303 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 RNH1P13489 461 aaKnown RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ETS2P15036 469 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 RHCEP18577 417 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ENDOUP21128 410 aaKnown RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 NT5EP21589 574 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 PRKACGP22612 351 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 IGFBP5P24593 272 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 RRM2P31350 389 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 MC3RP41968 323 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 RPL5P46777 297 aaKnown RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 KCNJ5P48544 419 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 CRYBA2P53672 197 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 IST1P53990 364 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 OLR1P78380 273 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 HPCAP84074 193 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 PPP2R2BQ00005 443 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 MYBPC1Q00872 1141 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 BNIP3Q12983 259 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 BIKQ13323 160 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 FAM53BQ14153 422 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 GRM7Q14831 915 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 LASP1Q14847 261 aaKnown RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 GPR19Q15760 415 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 FAM214AQ32MH5 1076 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF750Q32MQ0 723 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 GPAT3Q53EU6 434 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 SP5Q6BEB4 398 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ZCCHC12Q6PEW1 402 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 FAM214BQ7L5A3 538 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 KANSL1Q7Z3B3 1105 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 C16orf62Q7Z3J2 963 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 TMEM179BQ7Z7N9 219 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 KMT5CQ86Y97 462 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 GATAD2AQ86YP4 633 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 OR4N5Q8IXE1 308 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 C8orf59Q8N0T1 100 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 LGI4Q8N135 537 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF786Q8N393 782 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 SLC25A45Q8N413 288 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 MFSD4AQ8N468 514 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF610Q8N9Z0 462 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ATG16L2Q8NAA4 619 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 SETD9Q8NE22 299 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 C7orf57Q8NEG2 295 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 TSPAN14Q8NG11 270 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 OR6C4Q8NGE1 309 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 OR9A4Q8NGU2 314 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 SAP25Q8TEE9 199 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 GIPC3Q8TF64 312 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 NR4A3Q92570 626 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 KAT2AQ92830 837 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF285Q96NJ3 590 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 PTCHD1Q96NR3 888 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 COL21A1Q96P44 957 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 MS4A4EQ96PG1 132 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 OR7D2Q96RA2 312 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 CSF3RQ99062 836 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 PIP5K1AQ99755 562 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 TREX2Q9BQ50 279 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 BTBD2Q9BX70 525 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 FAM192AQ9GZU8 254 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ING2Q9H160 280 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 TOR3AQ9H497 397 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 SERHL2Q9H4I8 314 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 KRT84Q9NSB2 600 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 FAM118AQ9NWS6 357 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 NDUFAF4Q9P032 175 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 NTMQ9P121 344 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 SLC13A4Q9UKG4 626 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 CDC14AQ9UNH5 594 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 MAGED1Q9Y5V3 778 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-204ENST00000555890 ENPP4Q9Y6X5 453 aa6.33□□□□□ -1.4
SLIRP-204ENST00000555890 A0A087WXM4 84 aa6.32□□□□□ -1.4
SLIRP-204ENST00000555890 IGHV1OR21-1A0A087WYE8 117 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms