RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SFXN1Q9H9B4 322 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 TRPV4Q9HBA0 871 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 RANGRFQ9HD47 186 aaPredicted RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 PAQR5Q9NXK6 330 aaPredicted RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 ING3Q9NXR8 418 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 NTMQ9P121 344 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SERGEFQ9UGK8 458 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 NUFIP1Q9UHK0 495 aaKnown RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 KLHL21Q9UJP4 597 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 CBLCQ9ULV8 474 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 ZFR2Q9UPR6 939 aaKnown RBP6.52□□□□□ -1.37
TDP1-213ENST00000555880 TMEM5Q9Y2B1 443 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 PLEKHM1Q9Y4G2 1056 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 CSNK1G3Q9Y6M4 447 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 SCN3AQ9NY46 2000 aa6.52□□□□□ -1.37
TDP1-213ENST00000555880 DAPL1A0PJW8 107 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 RIIAD1A6NNX1 92 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 C12orf71A8MTZ7 269 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SOCS6O14544 535 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 PLA2G10O15496 165 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 LRRTM2O43300 516 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 RNF13O43567 381 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 RNGTTO60942 597 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 STX11O75558 287 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 NCR1O76036 304 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 RCBTB2O95199 551 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ZIC2O95409 532 aaPredicted RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 LALBAP00709 142 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 DBIP07108 87 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 LAMP2P13473 410 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 PEBP1P30086 187 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 CAPZA2P47755 286 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 MTNR1BP49286 362 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 RPS7P62081 194 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 CD83Q01151 205 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 CSTF1Q05048 431 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 ZNF155Q12901 538 aaPredicted RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 DUSP8Q13202 625 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 RIN1Q13671 783 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TRAM1Q15629 374 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 GPR68Q15743 365 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TATDN3Q17R31 274 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ZNF57Q68EA5 555 aaPredicted RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 THOC7Q6I9Y2 204 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 PLBD1Q6P4A8 553 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 FAM111BQ6SJ93 734 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 MEPCEQ7L2J0 689 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 PAQR7Q86WK9 346 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 RNF113BQ8IZP6 322 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 OR2L13Q8N349 312 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SIRT6Q8N6T7 355 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 KCT2Q8NC54 265 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 BBS1Q8NFJ9 593 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 NT5CQ8TCD5 201 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 OR2M4Q96R27 311 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TMEM43Q9BTV4 400 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 APOOQ9BUR5 198 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ALG8Q9BVK2 526 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 NDEL1Q9GZM8 345 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 HDHD2Q9H0R4 259 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 PPP1R3EQ9H7J1 279 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TRPV5Q9NQA5 729 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 INPP5EQ9NRR6 644 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 BABAM2Q9NXR7 383 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 IL20RAQ9UHF4 553 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 NTNG1Q9Y2I2 539 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SPACA6W5XKT8 324 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TBC1D3DA0A087WVF3 549 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TBC1D3IA0A087WXS9 549 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TBC1D3EA0A087X179 549 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 C2orf92A0A1B0GVN3 265 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 OR6C70A6NIJ9 312 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 PRR19A6NJB7 356 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SLC22A31A6NKX4 558 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 FAM183AA6NL82 134 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 GRXCR1A8MXD5 290 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TBC1D3LB9A6J9 549 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 PRR23D1E9PI22 279 aaPredicted RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 SGK494L7N484 410 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 GTPBP1O00178 669 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 BTN3A3O00478 584 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SLC2A10O95528 541 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 NTN1O95631 604 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 MT-ND5P03915 603 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TBC1D3HP0C7X1 549 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 PRR23D2P0DMB1 279 aaPredicted RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 IFI30P13284 250 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 CPMP14384 443 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ERP29P30040 261 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 IGFALSP35858 605 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 SLC16A1P53985 500 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 RAB25P57735 213 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 TAS2R43P59537 309 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 EEF1A1P68104 462 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 MRPL28Q13084 256 aaKnown RBP6.51□□□□□ -1.37
TDP1-213ENST00000555880 FGL2Q14314 439 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 DUSP5Q16690 384 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.51□□□□□ -1.37
TDP1-213ENST00000555880 IDNKQ5T6J7 187 aa6.51□□□□□ -1.37
TDP1-213ENST00000555880 BICRALQ6AI39 1079 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms