RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PCBP3P57721 371 aaKnown RBP13.04□□□□□ -0.32
CHD8-208ENST00000555301 KCNJ10P78508 379 aa13.04□□□□□ -0.32
CHD8-208ENST00000555301 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
CHD8-208ENST00000555301 FGFBP1Q14512 234 aa13.04□□□□□ -0.32
CHD8-208ENST00000555301 CD226Q15762 336 aa13.04□□□□□ -0.32
CHD8-208ENST00000555301 FAM180AQ6UWF9 173 aa13.04□□□□□ -0.32
CHD8-208ENST00000555301 OR4K17Q8NGC6 315 aa13.04□□□□□ -0.32
CHD8-208ENST00000555301 BBC3Q96PG8 261 aaPredicted RBP13.04□□□□□ -0.32
CHD8-208ENST00000555301 TTTY12Q9BZ98 90 aa13.04□□□□□ -0.32
CHD8-208ENST00000555301 RTN4RQ9BZR6 473 aa13.04□□□□□ -0.32
CHD8-208ENST00000555301 ARMC7Q9H6L4 198 aa13.04□□□□□ -0.32
CHD8-208ENST00000555301 PRPF19Q9UMS4 504 aaKnown RBP13.04□□□□□ -0.32
CHD8-208ENST00000555301 GPC6Q9Y625 555 aaPredicted RBP13.04□□□□□ -0.32
CHD8-208ENST00000555301 CENPVL1A0A0U1RR11 272 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 LRRC3CA6NJW4 275 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 TTLL8A6PVC2 850 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 GTPBP1O00178 669 aaKnown RBP13.03□□□□□ -0.32
CHD8-208ENST00000555301 GSTA4O15217 222 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 ZNF264O43296 627 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 EIF4E2O60573 245 aaKnown RBP13.03□□□□□ -0.32
CHD8-208ENST00000555301 GLSO94925 669 aaPredicted RBP13.03□□□□□ -0.32
CHD8-208ENST00000555301 CSTAP01040 98 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 IFNA14P01570 189 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 PABPC4LP0CB38 370 aaKnown RBP13.03□□□□□ -0.32
CHD8-208ENST00000555301 UBL4AP11441 157 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 HSD17B1P14061 328 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 HTR1EP28566 365 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 PRKAR1BP31321 381 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 PMP22Q01453 160 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 INPP5JQ15735 1006 aaPredicted RBP13.03□□□□□ -0.32
CHD8-208ENST00000555301 ZNF311Q5JNZ3 666 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 RNF220Q5VTB9 566 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 FNDC7Q5VTL7 733 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 CCDC121Q6ZUS5 278 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 CCDC80Q76M96 950 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 WDSUB1Q8N9V3 476 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 GATSQ8NAP1 163 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 BHLHE22Q8NFJ8 381 aaPredicted RBP13.03□□□□□ -0.32
CHD8-208ENST00000555301 RASSF5Q8WWW0 418 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 SLC7A6OSQ96CW6 309 aaPredicted RBP13.03□□□□□ -0.32
CHD8-208ENST00000555301 GNRHR2Q96P88 292 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 TAAR6Q96RI8 345 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 BTBD10Q9BSF8 475 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 PTGES2Q9H7Z7 377 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 AGPAT4Q9NRZ5 378 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 QPCTLQ9NXS2 382 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 SEC14L3Q9UDX4 400 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 CD300AQ9UGN4 299 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 ZNF443Q9Y2A4 671 aaPredicted RBP13.03□□□□□ -0.32
CHD8-208ENST00000555301 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 ATMQ13315 3056 aa13.03□□□□□ -0.32
CHD8-208ENST00000555301 NUP214P35658 2090 aaPredicted RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 M0QX08 132 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 TFECO14948 347 aaPredicted RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 HCRTR2O43614 444 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 GMNNO75496 209 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 RFC3P40938 356 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 SUMO3P55854 103 aaPredicted RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 PPIAP62937 165 aaKnown RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 ALDH6A1Q02252 535 aaKnown RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 GANABQ14697 944 aaKnown RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 OR5M10Q6IEU7 315 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 VRK2Q86Y07 508 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 ARMC8Q8IUR7 673 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 FAM109AQ8N4B1 249 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 CISD2Q8N5K1 135 aaKnown RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 TMEM251Q8N6I4 163 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 RNF148Q8N7C7 305 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 FADS6Q8N9I5 356 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 TOR1AIP2Q8NFQ8 470 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 B4GALNT2Q8NHY0 566 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 SLC26A7Q8TE54 656 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 SNRNP40Q96DI7 357 aaKnown RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 LAT2Q9GZY6 243 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 ZNF703Q9H7S9 590 aaPredicted RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 EXOSC3Q9NQT5 275 aaKnown RBP13.02□□□□□ -0.33
CHD8-208ENST00000555301 USP22Q9UPT9 525 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 CARD8Q9Y2G2 431 aa13.02□□□□□ -0.33
CHD8-208ENST00000555301 FAM166BA8MTA8 275 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 CXCR6O00574 342 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 GCM2O75603 506 aaPredicted RBP13.01□□□□□ -0.33
CHD8-208ENST00000555301 MFN2O95140 757 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 UBTFL6P0CB48 400 aaPredicted RBP13.01□□□□□ -0.33
CHD8-208ENST00000555301 GDF1P27539 372 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 KDELR2P33947 212 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 PGM1P36871 562 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 RNF144AP50876 292 aaPredicted RBP13.01□□□□□ -0.33
CHD8-208ENST00000555301 P2RX1P51575 399 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 DSCR4P56555 118 aaPredicted RBP13.01□□□□□ -0.33
CHD8-208ENST00000555301 EEF1A1P68104 462 aaKnown RBP13.01□□□□□ -0.33
CHD8-208ENST00000555301 ZNF117Q03924 483 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 EIPR1Q53HC9 387 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 COLEC12Q5KU26 742 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 MRPL2Q5T653 305 aaKnown RBP13.01□□□□□ -0.33
CHD8-208ENST00000555301 DHRS4L2Q6PKH6 230 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 GRAMD2AQ8IUY3 354 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 ZNF440Q8IYI8 595 aa13.01□□□□□ -0.33
CHD8-208ENST00000555301 FAM71CQ8NEG0 241 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms