RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ZNHIT3Q15649 155 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 CLEC12AQ5QGZ9 265 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 ACSM5Q6NUN0 579 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 C1orf94Q6P1W5 598 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 FIP1L1Q6UN15 594 aaKnown RBP11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 B3GNT6Q6ZMB0 384 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 PRR22Q8IZ63 422 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 GATSQ8NAP1 163 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 OR4C3Q8NH37 302 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 OR10H1Q9Y4A9 318 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 IGHV3-20A0A0C4DH32 117 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 H3BMQ9 156 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 RGS10O43665 173 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 SEC14L2O76054 403 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 STSP08842 583 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 JUNBP17275 347 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 CXCR4P61073 352 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 OR1Q1Q15612 314 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 BCORP1Q8N888 145 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 PFN4Q8NHR9 129 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 ADAMTS18Q8TE60 1221 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 IPCEF1Q8WWN9 437 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 MUL1Q969V5 352 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 CCDC74BQ96LY2 380 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 COG8Q96MW5 612 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 PRSS27Q9BQR3 290 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 COPS4Q9BT78 406 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 TRIM45Q9H8W5 580 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 TVP23BQ9NYZ1 205 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 MKL2Q9ULH7 1088 aa11.78□□□□□ -0.52
VIPAS39-206ENST00000553888 A0A1B0GX78 115 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 TMEM221A6NGB7 291 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 M0R296 226 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 DSCR3O14972 297 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 OMPP47874 163 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 CDC42P60953 191 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 RHAGQ02094 409 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 DSG2Q14126 1118 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 FAM69BQ5VUD6 431 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 NIPAL1Q6NVV3 410 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 COX15Q7KZN9 410 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 TCEANCQ8N8B7 351 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 CTRCQ99895 268 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 C20orf141Q9NUB4 165 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 WARS2Q9UGM6 360 aaKnown RBP11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 PSORS1C1Q9UIG5 152 aa11.77□□□□□ -0.52
VIPAS39-206ENST00000553888 RALGAPA1Q6GYQ0 2036 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 IGKV3D-11A0A0A0MRZ8 115 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 C17orf51A8MQB3 221 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 CDC42EP2O14613 210 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 GNB5O14775 395 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 PRKYO43930 277 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 ENTPD6O75354 484 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 GINS1Q14691 196 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 NSDHLQ15738 373 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 DTWD2Q8NBA8 298 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 B3GNT7Q8NFL0 401 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 IFI44Q8TCB0 444 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 GAL3ST4Q96RP7 486 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 VN1R1Q9GZP7 353 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 LRRN3Q9H3W5 708 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 ATP13A2Q9NQ11 1180 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 CBLCQ9ULV8 474 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.53
VIPAS39-206ENST00000553888 SLC37A1P57057 533 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 DOC2BQ14184 412 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 EIPR1Q53HC9 387 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 SLX4IPQ5VYV7 408 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 PWWP2BQ6NUJ5 590 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 SLC2A12Q8TD20 617 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 SIGLEC11Q96RL6 698 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 NXF5Q9H1B4 397 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 Q9N2J8 555 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 VCX3AQ9NNX9 186 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 OCIAD1Q9NX40 245 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 PTTG2Q9NZH5 202 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 GPR52Q9Y2T5 361 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 COL5A1P20908 1838 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 A0A1W2PPW3 197 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 LYPD3O95274 346 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 DDAH2O95865 285 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 CH25HO95992 272 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 DCKP27707 260 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 EMP3P54852 163 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 SERTAD2Q14140 314 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 PHF19Q5T6S3 580 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 C12orf73Q69YU5 71 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 RANBP3LQ86VV4 465 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 DEPDC4Q8N2C3 294 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 C7orf57Q8NEG2 295 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 KLHDC3Q9BQ90 382 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 NUDT9Q9BW91 350 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 FUNDC2Q9BWH2 189 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 ACOT13Q9NPJ3 140 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 DNAJB12Q9NXW2 375 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 CLCA3PQ9Y6N3 262 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 BLACEA4D250 179 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 CLCA1A8K7I4 914 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms