RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 H0YL77 283 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 KERAO60938 352 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 GPX5O75715 221 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 IGHV3-48P01763 117 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 PDHBP11177 359 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 ANP32AP39687 249 aaKnown RBP2.06□□□□□ -2.08
VRK1-202ENST00000553683 NUP107P57740 925 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 RPS8P62241 208 aaKnown RBP2.06□□□□□ -2.08
VRK1-202ENST00000553683 RPL8P62917 257 aaKnown RBP2.06□□□□□ -2.08
VRK1-202ENST00000553683 WASHC5Q12768 1159 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 CBX3Q13185 183 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 GAMTQ14353 236 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 CCDC92Q53HC0 331 aaPredicted RBP2.06□□□□□ -2.08
VRK1-202ENST00000553683 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 AGBL2Q5U5Z8 902 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 WDR74Q6RFH5 385 aaPredicted RBP2.06□□□□□ -2.08
VRK1-202ENST00000553683 TIFABQ6ZNK6 161 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 HSD11B1LQ7Z5J1 315 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 ZNF589Q86UQ0 364 aaPredicted RBP2.06□□□□□ -2.08
VRK1-202ENST00000553683 SKA3Q8IX90 412 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 ALLCQ8N6M5 410 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 ZSCAN4Q8NAM6 433 aaPredicted RBP2.06□□□□□ -2.08
VRK1-202ENST00000553683 MSANTD4Q8NCY6 345 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 FAM71CQ8NEG0 241 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 FAM210AQ96ND0 272 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 TXN2Q99757 166 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 NFKBIZQ9BYH8 718 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 CAB39LQ9H9S4 337 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 SH2D2AQ9NP31 389 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 GDAP2Q9NXN4 497 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 CNOT2Q9NZN8 540 aaKnown RBP2.06□□□□□ -2.08
VRK1-202ENST00000553683 P2RX2Q9UBL9 471 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 SUN2Q9UH99 717 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 LCMT1Q9UIC8 334 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 CRLS1Q9UJA2 301 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 KLK12Q9UKR0 248 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 ODF2LQ9ULJ1 636 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 SCML2Q9UQR0 700 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 CDH10Q9Y6N8 788 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 UBE4BO95155 1302 aa2.06□□□□□ -2.08
VRK1-202ENST00000553683 RNF222A6NCQ9 220 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 CFAP73A6NFT4 308 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 ZSCAN5BA6NJL1 495 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 HMMRO75330 724 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 BAG2O95816 211 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 CSF2P04141 144 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 UQCRBP14927 111 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 PRDX2P32119 198 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 GNPDA1P46926 289 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 HTR5AP47898 357 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 TFDP1Q14186 410 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 CCDC40Q4G0X9 1142 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 OR8G2PQ6IF36 304 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 Q7L0L9 218 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 ARMCX2Q7L311 632 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 RABEPKQ7Z6M1 372 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 RNF148Q8N7C7 305 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 CCDC47Q96A33 483 aaKnown RBP2.05□□□□□ -2.08
VRK1-202ENST00000553683 TMEM101Q96IK0 257 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 NSMCE2Q96MF7 247 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 RUFY1Q96T51 708 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 CHRDL1Q9BU40 450 aa2.05□□□□□ -2.08
VRK1-202ENST00000553683 TRIM64CA6NLI5 447 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 ABCD4O14678 606 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 MAGEB4O15481 346 aaPredicted RBP2.04□□□□□ -2.08
VRK1-202ENST00000553683 VDAC1P21796 283 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 UGT1A5P35504 534 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 GCKP35557 465 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 OSTNP61366 133 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 BDH1Q02338 343 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 FUT7Q11130 342 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 DAZ2Q13117 558 aaKnown RBP2.04□□□□□ -2.08
VRK1-202ENST00000553683 ASPHD2Q6ICH7 369 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 ARSKQ6UWY0 536 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 C1orf186Q6ZWK4 172 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 DCAF4L2Q8NA75 395 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 STKLD1Q8NE28 680 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 OR52E1Q8NGJ3 308 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 BLOC1S5Q8TDH9 187 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 SLC5A11Q8WWX8 675 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 OR1E3Q8WZA6 343 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 C14orf79Q96F83 325 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 SPATA13Q96N96 652 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 CITED1Q99966 193 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 SRXN1Q9BYN0 137 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 SLC25A51Q9H1U9 297 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 TMEM231Q9H6L2 316 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 SYTL2Q9HCH5 934 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 FANCFQ9NPI8 374 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 ZNF331Q9NQX6 463 aaPredicted RBP2.04□□□□□ -2.08
VRK1-202ENST00000553683 DAZ3Q9NR90 486 aaKnown RBP2.04□□□□□ -2.08
VRK1-202ENST00000553683 MMP26Q9NRE1 261 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 IL20RAQ9UHF4 553 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 RIMS3Q9UJD0 308 aa2.04□□□□□ -2.08
VRK1-202ENST00000553683 FANCIQ9NVI1 1328 aa2.03□□□□□ -2.08
VRK1-202ENST00000553683 IGLV3-16A0A075B6K0 115 aa2.03□□□□□ -2.08
VRK1-202ENST00000553683 SYCE3A1L190 88 aa2.03□□□□□ -2.08
VRK1-202ENST00000553683 USP27XA6NNY8 438 aa2.03□□□□□ -2.08
VRK1-202ENST00000553683 WASH3PC4AMC7 463 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms