RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 DDX47Q9H0S4 455 aaKnown RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 RPF2Q9H7B2 306 aaKnown RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 PTGES2Q9H7Z7 377 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 FOLH1BQ9HBA9 442 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 SAYSD1Q9NPB0 183 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 MYNNQ9NPC7 610 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 SLC52A3Q9NQ40 469 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 CHRAC1Q9NRG0 131 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 SDHAF3Q9NRP4 125 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 HIF1ANQ9NWT6 349 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TAS2R16Q9NYV7 291 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 MARCH4Q9P2E8 410 aaPredicted RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 GALPQ9UBC7 116 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TESQ9UGI8 421 aaKnown RBP4.55□□□□□ -1.68
CKAP4-203ENST00000553039 PYCARDQ9ULZ3 195 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 CAPN11Q9UMQ6 739 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ERVK-19Q9WJR5 959 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 PDE10AQ9Y233 779 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF337Q9Y3M9 751 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 TCAF1Q9Y4C2 921 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 AP4B1Q9Y6B7 739 aa4.55□□□□□ -1.68
CKAP4-203ENST00000553039 A0A0G2JN53 185 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 GOLGA8QA0A0J9YX86 632 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 GOLGA8OA6NCC3 632 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 EFCAB8A8MWE9 144 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 GOLGA8NF8WBI6 632 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 GOLGA8MH3BSY2 632 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 GOLGA8RI6L899 631 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ACOX3O15254 700 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 SEC14L5O43304 696 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ZSCAN12O43309 604 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 PSTPIP1O43586 416 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 AKR1B10O60218 316 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 PLOD3O60568 738 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 AQP8O94778 261 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 TJP3O95049 919 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 VAPBO95292 243 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 IPO7O95373 1038 aaKnown RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 METTL18O95568 372 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 STAMBPO95630 424 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 GPR75O95800 540 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ADAP00813 363 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 LTA4HP09960 611 aaKnown RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 CCDC175P0C221 793 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 PRKCAP17252 672 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 COMTP21964 271 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 MGAT1P26572 445 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ABCD3P28288 659 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ECHS1P30084 290 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 STIP1P31948 543 aaKnown RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 KHKP50053 298 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 SUCLG1P53597 346 aaKnown RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 NAP1L1P55209 391 aaKnown RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 SNRPD2P62316 118 aaKnown RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 IGLV3-21P80748 117 aaPredicted RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ZBED6P86452 979 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 HMGCS1Q01581 520 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF844Q08AG5 666 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 RASGEF1BQ0VAM2 473 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 KIF5AQ12840 1032 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 CTBP1Q13363 440 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 STK11Q15831 433 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 TCHHL1Q5QJ38 904 aaPredicted RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF362Q5T0B9 420 aaPredicted RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 C6orf163Q5TEZ5 329 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 RAD9BQ6WBX8 426 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 GALNT5Q7Z7M9 940 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 TMEM139Q8IV31 216 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 KATNAL2Q8IYT4 538 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ZNF619Q8N2I2 560 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 SVOPQ8N4V2 548 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 METTL25Q8N6Q8 603 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ZDHHC22Q8N966 263 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 OR7G1Q8NGA0 311 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 OR4K17Q8NGC6 315 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 OR52B6Q8NGF0 335 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 OR8K1Q8NGG5 319 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 OR5AN1Q8NGI8 311 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 OR56A3Q8NH54 315 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 SNX33Q8WV41 574 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 NEU4Q8WWR8 484 aaPredicted RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 KRT35Q92764 455 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 KCNJ9Q92806 393 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 NEIL2Q969S2 332 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 SLC25A28Q96A46 364 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 VPS39Q96JC1 886 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 MAELQ96JY0 434 aaKnown RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 KCNC2Q96PR1 638 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 HBEGFQ99075 208 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 NDNQ99608 321 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 NT5DC2Q9H857 520 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 BCO1Q9HAY6 547 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 RRAGDQ9NQL2 400 aaPredicted RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 PRDM7Q9NQW5 492 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 INTS10Q9NVR2 710 aaKnown RBP4.54□□□□□ -1.68
CKAP4-203ENST00000553039 NSMCE4AQ9NXX6 385 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 BFARQ9NZS9 450 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 KIF17Q9P2E2 1029 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 ZDHHC8Q9ULC8 765 aa4.54□□□□□ -1.68
CKAP4-203ENST00000553039 MMP24Q9Y5R2 645 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms