RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 GNB5O14775 395 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 HCRTR2O43614 444 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 SCO2O43819 266 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 CSTAP01040 98 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 TPOP07202 933 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 THBS1P07996 1170 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 PABPC4LP0CB38 370 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 UBL4AP11441 157 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 CPN1P15169 458 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 GPX2P18283 190 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 GNLYP22749 145 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 ELK4P28324 431 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 GAS1P54826 345 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 KLF10Q13118 480 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 ART3Q13508 389 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 FGFBP1Q14512 234 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 GPR68Q15743 365 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 LIN52Q52LA3 116 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 GCNT6Q5T4J0 391 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 VASNQ6EMK4 673 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 REEP3Q6NUK4 255 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 ERICH5Q6P6B1 374 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 SERPINA11Q86U17 422 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 WDSUB1Q8N9V3 476 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 FAM83FQ8NEG4 500 aaPredicted RBP9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 OR5D16Q8NGK9 328 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 OR4C3Q8NH37 302 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 FBXO30Q8TB52 745 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 C10orf82Q8WW14 230 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 ASB5Q8WWX0 329 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 ST8SIA1Q92185 356 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 C1GALT1C1Q96EU7 318 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 THOC1Q96FV9 657 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 SFXN2Q96NB2 322 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 LRRC37BQ96QE4 947 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 CGREF1Q99674 301 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 ELAC2Q9BQ52 826 aaKnown RBP9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 ECSITQ9BQ95 431 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 INPP5KQ9BT40 448 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 LAT2Q9GZY6 243 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 RUBCNLQ9H714 662 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 GALNT9Q9HCQ5 603 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 BCL2L10Q9HD36 194 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 KLHL28Q9NXS3 571 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 ANGPT4Q9Y264 503 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 LRRK2Q5S007 2527 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 DNAJC13O75165 2243 aa9.35□□□□□ -0.91
TRAFD1-208ENST00000552890 GTF3C1Q12789 2109 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 UBR5O95071 2799 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 AGAP5A6NIR3 686 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 NPIPA2E9PIF3 369 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 NPIPB9F8W1W9 429 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 NPIPA3F8WFD2 350 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 CCL21O00585 134 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 H6PDO95479 791 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 NUDT14O95848 222 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 FAM107AO95990 144 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 GSNP06396 782 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 FCGR2AP12318 317 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 NID1P14543 1247 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 HK1P19367 917 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 CAPN3P20807 821 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 ACVR2AP27037 513 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 PEX19P40855 299 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 RFC3P40938 356 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 PTGDSP41222 190 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 ZFP36L2P47974 494 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 CLK1P49759 484 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 COPZ1P61923 177 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 KCNJ10P78508 379 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 UBAP2LQ14157 1087 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 CYP51A1Q16850 503 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 GXYLT1Q4G148 440 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 RNFT1Q5M7Z0 435 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 GTF2IRD2BQ6EKJ0 949 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 OR2A2Q6IF42 318 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 SLC2A7Q6PXP3 512 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 B3GNT6Q6ZMB0 384 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 ZNF550Q7Z398 422 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 WDR53Q7Z5U6 358 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 MARCH3Q86UD3 253 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 GTF2IRD2Q86UP8 949 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 LACC1Q8IV20 430 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 GTPBP8Q8N3Z3 284 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 ZNF614Q8N883 585 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 HIPK4Q8NE63 616 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 OR2M3Q8NG83 312 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 ZPLD1Q8TCW7 415 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 SSC4DQ8WTU2 575 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 SLC25A43Q8WUT9 341 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 RND1Q92730 232 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 POP5Q969H6 163 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 ARSGQ96EG1 525 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 MRGPRX4Q96LA9 322 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 ANKRD27Q96NW4 1050 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 FAM107BQ9H098 131 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 DSN1Q9H410 356 aa9.34□□□□□ -0.91
TRAFD1-208ENST00000552890 CALHM2Q9HA72 323 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms