RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 AMD1P17707 334 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 MAGP20916 626 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PTAFRP25105 342 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 GABRA5P31644 462 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 MC5RP33032 325 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SPAM1P38567 509 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 GRIA1P42261 906 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 OR1D4P47884 311 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 MARCKSL1P49006 195 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TERF1P54274 439 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CDH13P55290 713 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PLIN5Q00G26 463 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF155Q12901 538 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 HSPB3Q12988 150 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PLA2G7Q13093 441 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 RPA4Q13156 261 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CAMK2DQ13557 499 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 DHX34Q14147 1143 aaKnown RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 FASTKQ14296 549 aaKnown RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 MELKQ14680 651 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 KIR2DS3Q14952 304 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TAF1AQ15573 450 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 OASLQ15646 514 aaKnown RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 DEFB110Q30KQ9 67 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CMPK2Q5EBM0 449 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 VWA2Q5GFL6 755 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 KRBOX4Q5JUW0 171 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PAPPA-AS1Q5QFB9 102 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 LDLRAP1Q5SW96 308 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 LCE5AQ5TCM9 118 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM211Q6ICI0 200 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 DCUN1D2Q6PH85 259 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 AFTPHQ6ULP2 937 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PET117Q6UWS5 81 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ISLR2Q6UXK2 745 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 FAM151BQ6UXP7 276 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 RBPMS2Q6ZRY4 209 aaKnown RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PLEKHM3Q6ZWE6 761 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PRSS41Q7RTY9 318 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CENPVQ7Z7K6 275 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 NT5DC3Q86UY8 548 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 AMIGO1Q86WK6 493 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PAQR7Q86WK9 346 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM126BQ8IUX1 230 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 HSCBQ8IWL3 235 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TBC1D21Q8IYX1 336 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SLC22A15Q8IZD6 547 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 FBXL14Q8N1E6 418 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CIARTQ8N365 385 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CLIP4Q8N3C7 705 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ZADH2Q8N4Q0 377 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ATPAF2Q8N5M1 289 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 C1orf52Q8N6N3 182 aaKnown RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ZFP62Q8NB50 900 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PAPD5Q8NDF8 572 aaKnown RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 OR2AK2Q8NG84 335 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 OR4K2Q8NGD2 314 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 OR5R1Q8NH85 324 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 OR5K2Q8NHB8 316 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 KIF18AQ8NI77 898 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 WDR20Q8TBZ3 569 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ELP5Q8TE02 316 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TFGQ92734 400 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 KRT35Q92764 455 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TANKQ92844 425 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SLAMF9Q96A28 289 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 C8orf44Q96CB5 159 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 NXNL1Q96CM4 212 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 MTERF3Q96E29 417 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SMIM10Q96HG1 83 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CDKN2AIPNLQ96HQ2 116 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 FER1L6-AS2Q96M78 137 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 C12orf66Q96MD2 445 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 GPR137Q96N19 417 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 QKIQ96PU8 341 aaKnown RBP eCLIP2.14□□□□□ -2.072e-15■■■■■ 33.4
CPSF6-207ENST00000551516 SEPHS2Q99611 448 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 GFI1Q99684 422 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 CCM2Q9BSQ5 444 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 NAA11Q9BSU3 229 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 RAB11FIP5Q9BXF6 653 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 VN1R1Q9GZP7 353 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SEMA6AQ9H2E6 1030 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 NOL11Q9H8H0 719 aaKnown RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 ZDHHC11Q9H8X9 412 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 TREX1Q9NSU2 369 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 DEPPQ9NTK1 212 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 MRGBPQ9NV56 204 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SMARCAL1Q9NZC9 954 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PKD2L2Q9NZM6 624 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 OR6C2Q9NZP2 312 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 RCC2Q9P258 522 aaKnown RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 STOX2Q9P2F5 926 aaPredicted RBP2.14□□□□□ -2.07
CPSF6-207ENST00000551516 GALPQ9UBC7 116 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 FAM153AQ9UHL3 310 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 MOSPD1Q9UJG1 213 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 SNX7Q9UNH6 387 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 PLCL2Q9UPR0 1127 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 VDAC3Q9Y277 283 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 AMDHD2Q9Y303 409 aa2.14□□□□□ -2.07
CPSF6-207ENST00000551516 L3MBTL1Q9Y468 752 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms