RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 HS3ST1O14792 307 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 TBX19O60806 448 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 IGKV1D-16P01601 117 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 THBDP07204 575 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 NEFHP12036 1026 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 PSMB1P20618 241 aaKnown RBP20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 ATP5J2P56134 94 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 KIAA0040Q15053 153 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 FIGNL1Q6PIW4 674 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 C22orf34Q6ZV56 151 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 R3HCC1LQ7Z5L2 792 aaKnown RBP20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 TRABD2AQ86V40 505 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 COX18Q8N8Q8 333 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 GATSQ8NAP1 163 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 B4GALNT2Q8NHY0 566 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 TRMT61AQ96FX7 289 aaKnown RBP20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 CHMP6Q96FZ7 201 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 RNF145Q96MT1 663 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 TMED5Q9Y3A6 229 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 JMJD1CQ15652 2540 aa20.64■□□□□ 0.89
SMARCD1-209ENST00000550477 CSPG4Q6UVK1 2322 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 A0A1W2PQD3 144 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 NPIPB8E9PQR5 432 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 SOX30O94993 753 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 KCNK2O95069 426 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 OPN1LWP04000 364 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 CPA3P15088 417 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 MAP3K8P41279 467 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 ASMTP46597 345 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 RNPS1Q15287 305 aaKnown RBP20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 PLPPR5Q32ZL2 321 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 GALNT10Q86SR1 603 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 LILRA2Q8N149 483 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 CEP112Q8N8E3 955 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 ZNF527Q8NB42 609 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 JADE3Q92613 823 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 CPNE4Q96A23 557 aaPredicted RBP20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 CIDECQ96AQ7 238 aaPredicted RBP20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 SH3YL1Q96HL8 342 aaPredicted RBP20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 ADGRG7Q96K78 797 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 USB1Q9BQ65 265 aaKnown RBP20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 ZNF701Q9NV72 531 aaPredicted RBP20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 OXSMQ9NWU1 459 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 NTMQ9P121 344 aa20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 RAI1Q7Z5J4 1906 aaPredicted RBP20.63■□□□□ 0.89
SMARCD1-209ENST00000550477 H3BNH8 94 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 AKAP10O43572 662 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 PROCP04070 461 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 FESP07332 822 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 ATP6V1C1P21283 382 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 RPS4XP62701 263 aaKnown RBP20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 CTU2Q2VPK5 515 aaKnown RBP20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 LIPMQ5VYY2 423 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 ANKRD26P1Q6NSI1 321 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 MTERF4Q7Z6M4 381 aaKnown RBP20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 FAM110BQ8TC76 370 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 MTERF3Q96E29 417 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 KLHL15Q96M94 604 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 TSSK3Q96PN8 268 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 HOXD1Q9GZZ0 328 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 C12orf49Q9H741 205 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 EMCNQ9ULC0 261 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 CCL27Q9Y4X3 112 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 USF3Q68DE3 2245 aa20.62■□□□□ 0.89
SMARCD1-209ENST00000550477 A0A0J9YW62 118 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 A0A1W2PPM1 405 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 AZIN1O14977 448 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 PLIN3O60664 434 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 NUDT14O95848 222 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 ACP2P11117 423 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 ELK4P28324 431 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 AGTR1P30556 359 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 CRHR1P34998 444 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 RPL3P39023 403 aaKnown RBP20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 POU6F2P78424 691 aaPredicted RBP20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 ETFDHQ16134 617 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 CLEC6AQ6EIG7 209 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 ALKBH2Q6NS38 261 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 MFSD12Q6NUT3 480 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 LRIG3Q6UXM1 1119 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 SLC16A11Q8NCK7 471 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 AKAP1Q92667 903 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 ESRP2Q9H6T0 727 aaKnown RBP20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 TMEM185BQ9H7F4 350 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 PPCSQ9HAB8 311 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 LAMP3Q9UQV4 416 aa20.61■□□□□ 0.89
SMARCD1-209ENST00000550477 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 INAFM1C9JVW0 142 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 KIF2AO00139 706 aaPredicted RBP20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 COPEO14579 308 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 IL32P24001 234 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 PSMA4P25789 261 aaKnown RBP20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 ADH6P28332 368 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 FRKP42685 505 aaPredicted RBP20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 DUSP5Q16690 384 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 PRIMA1Q86XR5 153 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 FBXO30Q8TB52 745 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 PHOSPHO1Q8TCT1 267 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 MZB1Q8WU39 189 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 HSD17B8Q92506 261 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms