RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 SYPL1Q16563 259 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 GGTA1PQ4G0N0 100 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 SEL1L3Q68CR1 1132 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 REP15Q6BDI9 236 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 TMEM225Q6GV28 225 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 ZSCAN25Q6NSZ9 544 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 EMBQ6PCB8 327 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 REG3GQ6UW15 175 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 TMEM184AQ6ZMB5 413 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 TMEM123Q8N131 208 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 ZSCAN4Q8NAM6 433 aaPredicted RBP4.71□□□□□ -1.66
HCFC2-204ENST00000550335 BHLHE23Q8NDY6 225 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 NANPQ8TBE9 248 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 M1APQ8TC57 530 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 FBXO32Q969P5 355 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 TUBGCP3Q96CW5 907 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 SLC45A3Q96JT2 553 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 AGAP3Q96P47 875 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 RIT2Q99578 217 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 NPAS2Q99743 824 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 TMEM121Q9BTD3 319 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 CIDEBQ9UHD4 219 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 BARX2Q9UMQ3 279 aaPredicted RBP4.71□□□□□ -1.66
HCFC2-204ENST00000550335 EIF3LQ9Y262 564 aaKnown RBP4.71□□□□□ -1.66
HCFC2-204ENST00000550335 MAB21L2Q9Y586 359 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 SPACA6W5XKT8 324 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 CLTCL1P53675 1640 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 NEXMIFQ5QGS0 1516 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 DCCP43146 1447 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 SPATA31E1Q6ZUB1 1445 aa4.71□□□□□ -1.66
HCFC2-204ENST00000550335 MSH6P52701 1360 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 A0A1B0GTH9 108 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 RPL37AP8A6NKH3 93 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 AP3B1O00203 1094 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 CXCL11O14625 94 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ARPC3O15145 178 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 TPST2O60704 377 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ZG16O60844 167 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 TRIM49P0CI25 452 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 TRIM49CP0CI26 452 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ZNF44P15621 663 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 NT5EP21589 574 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 UGT1A4P22310 534 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 BDKRB1P46663 353 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 GNPDA1P46926 289 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ZNF33BQ06732 778 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 CD300CQ08708 224 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 FGL1Q08830 312 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 DDX39BQ13838 428 aaKnown RBP4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ATXN7L3Q14CW9 347 aaPredicted RBP4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ABRAXAS2Q15018 415 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 PDK3Q15120 406 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 C14orf28Q4W4Y0 310 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ARMCX5Q6P1M9 558 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 DOK6Q6PKX4 331 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 EFL1Q7Z2Z2 1120 aaKnown RBP4.7□□□□□ -1.66
HCFC2-204ENST00000550335 HSD11B1LQ7Z5J1 315 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 VSTM4Q8IW00 320 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ZNF683Q8IZ20 524 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 ZNF491Q8N8L2 437 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 OR13C2Q8NGS9 318 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 NPRL2Q8WTW4 380 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 OMDQ99983 421 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 SYT11Q9BT88 431 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 FGFBP2Q9BYJ0 223 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 CRNKL1Q9BZJ0 848 aaKnown RBP4.7□□□□□ -1.66
HCFC2-204ENST00000550335 TRIM9Q9C026 710 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 NXF5Q9H1B4 397 aaKnown RBP4.7□□□□□ -1.66
HCFC2-204ENST00000550335 MRPL39Q9NYK5 338 aaKnown RBP4.7□□□□□ -1.66
HCFC2-204ENST00000550335 CRLS1Q9UJA2 301 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 STRCP1A6NGW2 1772 aa4.7□□□□□ -1.66
HCFC2-204ENST00000550335 CHD2O14647 1828 aaKnown RBP4.69□□□□□ -1.66
HCFC2-204ENST00000550335 KIF1BO60333 1816 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 TCF20Q9UGU0 1960 aaKnown RBP4.69□□□□□ -1.66
HCFC2-204ENST00000550335 ALKQ9UM73 1620 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 BCLAF3A2AJT9 711 aaKnown RBP4.69□□□□□ -1.66
HCFC2-204ENST00000550335 ZSCAN5BA6NJL1 495 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 CCDC169A6NNP5 214 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 FCN1O00602 326 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 PRRG1O14668 218 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 GPRIN2O60269 458 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 B4GALT2O60909 372 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 B3GAT3O94766 335 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 LRATO95237 230 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 IGHG1P01857 330 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 IGF1P05019 195 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 WNT2P09544 360 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 SDC1P18827 310 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 ATP5A1P25705 553 aaKnown RBP4.69□□□□□ -1.66
HCFC2-204ENST00000550335 GDI1P31150 447 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 HPCAL1P37235 193 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 HILS1P60008 231 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 OTUD4Q01804 1114 aaKnown RBP4.69□□□□□ -1.66
HCFC2-204ENST00000550335 BDH1Q02338 343 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 TMEM52BQ4KMG9 183 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 FILIP1LQ4L180 1135 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 CYBRD1Q53TN4 286 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 MS4A13Q5J8X5 152 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 OR8G2PQ6IF36 304 aa4.69□□□□□ -1.66
HCFC2-204ENST00000550335 ACSM5Q6NUN0 579 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms