RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 LIX1Q8N485 282 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 OR1L3Q8NH93 324 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ZPLD1Q8TCW7 415 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ST8SIA4Q92187 359 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 RPL10LQ96L21 214 aaKnown RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 C16orf92Q96LL3 132 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF300Q96RE9 604 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 FAM118BQ9BPY3 351 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 CENPKQ9BS16 269 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MECRQ9BV79 373 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 TM6SF2Q9BZW4 377 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 TMEM168Q9H0V1 697 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 GPN2Q9H9Y4 310 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 BCO1Q9HAY6 547 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 PSME2Q9UL46 239 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 MOKQ9UQ07 419 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 ANGPT4Q9Y264 503 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SLC22A14Q9Y267 594 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 POFUT2Q9Y2G5 429 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 NOX1Q9Y5S8 564 aa4.48□□□□□ -1.69
SCAF11-212ENST00000549162 SPIN1Q9Y657 262 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-212ENST00000549162 A0A087WUJ7 227 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 A0A0U1RQS6 177 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 A0A1W2PNU3 283 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 TMEM129A0AVI4 362 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 OR6B1O95007 311 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 NTRK1P04629 796 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 ISG15P05161 165 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 PCCBP05166 539 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SERPINA7P05543 415 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 ATP6V1B1P15313 513 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 EIF1P41567 113 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 ARL4DP49703 201 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 COPZ1P61923 177 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 TSPAN31Q12999 210 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CAPRIN1Q14444 709 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 MICAQ29983 383 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 C3orf38Q5JPI3 329 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 GCNT6Q5T4J0 391 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 Q6ZS49 121 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SYS1Q8N2H4 156 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 GTPBP8Q8N3Z3 284 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 LNX2Q8N448 690 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 C17orf78Q8N4C9 275 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 OR2M7Q8NG81 312 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 OR4K14Q8NGD5 310 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 MFSD8Q8NHS3 518 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 WDFY2Q96P53 400 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 PIP5K1AQ99755 562 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 RBM4BQ9BQ04 359 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 RBM4Q9BWF3 364 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 C12orf65Q9H3J6 166 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 C2orf42Q9NWW7 574 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SPHK1Q9NYA1 384 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 ABI3Q9P2A4 366 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SEC14L4Q9UDX3 406 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 A0A1W2PPL8 197 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 WIPF3A6NGB9 483 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 MRASO14807 208 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CREG1O75629 220 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 PSMA1P25786 263 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 MPLP40238 635 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 APOBEC1P41238 236 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SEPHS1P49903 392 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 ATP12AP54707 1039 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 LGALS4P56470 323 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 RPS13P62277 151 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 IRF8Q02556 426 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 PTPRCAPQ14761 206 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CCDC58Q4VC31 144 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 GPAT3Q53EU6 434 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CPTPQ5TA50 214 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 LCN1P1Q5VSP4 162 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SLC22A25Q6T423 547 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SCIMPQ6UWF3 145 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 NPSR1Q6W5P4 371 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 C16orf62Q7Z3J2 963 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SLC46A3Q7Z3Q1 461 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CFAP206Q8IYR0 622 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 C11orf65Q8NCR3 313 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 AGBL5Q8NDL9 886 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 B3GNT7Q8NFL0 401 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 C12orf66Q96MD2 445 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SRMSQ9H3Y6 488 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CALHM2Q9HA72 323 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CCNB1IP1Q9NPC3 277 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CUTCQ9NTM9 273 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 VAPAQ9P0L0 249 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 MRPS33Q9Y291 106 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 HEMK1Q9Y5R4 338 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 PHF3Q92576 2039 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 LINGO3P0C6S8 592 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 HLA-EP13747 358 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 FGF9P31371 208 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 AQP6Q13520 282 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 HACD4Q5VWC8 232 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SLC30A9Q6PML9 568 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 DTWD1Q8N5C7 304 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 METTL6Q8TCB7 284 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms