RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 PLSCR4Q9NRQ2 329 aa13.6□□□□□ -0.23
SNX29P1-201ENST00000548357 NTMQ9P121 344 aa13.6□□□□□ -0.23
SNX29P1-201ENST00000548357 ALPK2Q86TB3 2170 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 LINC01387J3KSC0 135 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 AZIN1O14977 448 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 LSM1O15116 133 aaKnown RBP13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 NDUFB5O43674 189 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 TBX19O60806 448 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 IFI6P09912 130 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 ZNF17P17021 662 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 PCSK6P29122 969 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 CRHR1P34998 444 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 RPS3AP61247 264 aaKnown RBP13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 FOXF1Q12946 379 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 CAPRIN1Q14444 709 aaKnown RBP13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 CFAP157Q5JU67 520 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 OR6K3Q8NGY3 331 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 ROBO4Q8WZ75 1007 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 CDS1Q92903 461 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 PIGTQ969N2 578 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 PPCDCQ96CD2 204 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 CCDC126Q96EE4 140 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 FAM120BQ96EK7 910 aaKnown RBP13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 MS4A4EQ96PG1 132 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 CCT7Q99832 543 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 GIN1Q9NXP7 522 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 SH3BP4Q9P0V3 963 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 MRTO4Q9UKD2 239 aaKnown RBP13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 KCNE3Q9Y6H6 103 aa13.59□□□□□ -0.23
SNX29P1-201ENST00000548357 ARHGEF9O43307 516 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 NGFRP08138 427 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 AGTR1P30556 359 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 ARRB2P32121 409 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 CLK3P49761 638 aaKnown RBP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 PSMD4P55036 377 aaKnown RBP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 NR1H2P55055 460 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 ZNF117Q03924 483 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 TOMM34Q15785 309 aaPredicted RBP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 UGT3A2Q3SY77 523 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 CCDC153Q494R4 210 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 GALNTL6Q49A17 601 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 LIPMQ5VYY2 423 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 CBLN3Q6UW01 205 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 ZNF704Q6ZNC4 412 aaPredicted RBP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 NUFIP2Q7Z417 695 aaKnown RBP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 WFDC8Q8IUA0 241 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 CDRT4Q8N9R6 151 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 CCDC63Q8NA47 563 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 OR7A2PQ8NGA2 310 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 OR2V1Q8NHB1 315 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 RAB3IL1Q8TBN0 382 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 PLPPR2Q96GM1 343 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 ZNF764Q96H86 408 aaPredicted RBP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 GMPPAQ96IJ6 420 aaPredicted RBP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 MECRQ9BV79 373 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 PRRG4Q9BZD6 226 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 C3orf14Q9HBI5 128 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 WBP11Q9Y2W2 641 aaKnown RBP13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 EMC9Q9Y3B6 208 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 DNAJC15Q9Y5T4 150 aa13.58□□□□□ -0.24
SNX29P1-201ENST00000548357 HEATR1Q9H583 2144 aaKnown RBP13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 C7orf72A4D263 438 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 INAFM1C9JVW0 142 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 SLC28A1O00337 649 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 PIP5K1BO14986 540 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 ADAMDEC1O15204 470 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 RGS14O43566 566 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 LINGO3P0C6S8 592 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 FCGR2AP12318 317 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 BCKDHAP12694 445 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 FPR1P21462 350 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 EDNRAP25101 427 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 SFTPDP35247 375 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 MANFP55145 182 aaKnown RBP13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 OCRLQ01968 901 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 KRTAP1-1Q07627 177 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 C20orf204Q6ZNR8 217 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 OLIG3Q7RTU3 272 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 LILRB1Q8NHL6 650 aaPredicted RBP13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 ABHD3Q8WU67 409 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 UBLCP1Q8WVY7 318 aaPredicted RBP13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 NEUROG1Q92886 237 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 C3orf30Q96M34 536 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 MDFIQ99750 246 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 TMEM204Q9BSN7 226 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 GSX2Q9BZM3 304 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 ACTR6Q9GZN1 396 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 COQ10BQ9H8M1 238 aa13.57□□□□□ -0.24
SNX29P1-201ENST00000548357 COPEO14579 308 aa13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 GCM2O75603 506 aaPredicted RBP13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 PLGP00747 810 aaPredicted RBP13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 LAMP1P11279 417 aa13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 KRT4P19013 534 aa13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 ALDH3A1P30838 453 aa13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 CTBP2P56545 445 aa13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 RAC1P63000 192 aa13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 FGFBP1Q14512 234 aa13.56□□□□□ -0.24
SNX29P1-201ENST00000548357 LASP1Q14847 261 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms