RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GIMAP5Q96F15 307 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 SH3YL1Q96HL8 342 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 FCRL1Q96LA6 429 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 PPP3R2Q96LZ3 170 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 C3orf30Q96M34 536 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 MS4A4EQ96PG1 132 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 NPAS1Q99742 590 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 MED18Q9BUE0 208 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 C1orf50Q9BV19 199 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 CXXC4Q9H2H0 198 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 PLEKHF2Q9H8W4 249 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 L2HGDHQ9H9P8 463 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 UBQLN4Q9NRR5 601 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ACSS1Q9NUB1 689 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ZCCHC3Q9NUD5 404 aaKnown RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 GIN1Q9NXP7 522 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 KLHL28Q9NXS3 571 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 NOP53Q9NZM5 478 aaKnown RBP6.03□□□□□ -1.44
SCAF11-211ENST00000547950 STOML1Q9UBI4 398 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 ATP6V1HQ9UI12 483 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 CLEC4AQ9UMR7 237 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 TMED5Q9Y3A6 229 aa6.03□□□□□ -1.44
SCAF11-211ENST00000547950 SPG11Q96JI7 2443 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 A0A087WZY1 265 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 IGLV3-32A0A0A0MS00 114 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 A0A1W2PPR1 153 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ALG1L2C9J202 215 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 C16orf97H3BN30 126 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 SCDO00767 359 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 SCAMP2O15127 329 aaKnown RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 CFLARO15519 480 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 SKAP2O75563 359 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 AQP8O94778 261 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ATE1O95260 518 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 NUDT14O95848 222 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PLGP00747 810 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 CGAP01215 116 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 HRGP04196 525 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 BPGMP07738 259 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 IFI6P09912 130 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 NUDT17P0C025 328 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 POU2F1P14859 743 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ATP6V1C1P21283 382 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ARRB2P32121 409 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 UGT2B10P36537 528 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 FRKP42685 505 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 SLC6A8P48029 635 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 CCT3P49368 545 aaKnown RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PRIM2P49643 509 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF41P51814 821 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 CTBP2P56545 445 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ADAM8P78325 824 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 POU6F2P78424 691 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 FOXD4Q12950 439 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 TP53BP2Q13625 1128 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 LASP1Q14847 261 aaKnown RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PTGR1Q14914 329 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 TMEM44Q2T9K0 475 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 DEFB113Q30KQ7 82 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PGS1Q32NB8 556 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ATP6AP1LQ52LC2 224 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 C6orf136Q5SQH8 315 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ZCCHC12Q6PEW1 402 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PAMR1Q6UXH9 720 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 RNF165Q6ZSG1 346 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 FAM214BQ7L5A3 538 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF550Q7Z398 422 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 CAMKMTQ7Z624 323 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 GGNQ86UU5 652 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 NUDCD3Q8IVD9 361 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 HOMEZQ8IX15 550 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 DEPDC4Q8N2C3 294 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 RIBC1Q8N443 379 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 KRTCAP2Q8N6L1 136 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 FNDC5Q8NAU1 212 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ATP6V1C2Q8NEY4 427 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 OR6Y1Q8NGX8 325 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 B4GALNT2Q8NHY0 566 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PPP1R14CQ8TAE6 165 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 FAM110BQ8TC76 370 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PHOSPHO1Q8TCT1 267 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ADAMTS15Q8TE58 950 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 OR5P2Q8WZ92 322 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 CDS1Q92903 461 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 TUBGCP3Q96CW5 907 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 MBD6Q96DN6 1003 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 FAM120BQ96EK7 910 aaKnown RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PIK3IP1Q96FE7 263 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ZC3HAV1LQ96H79 300 aaKnown RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF764Q96H86 408 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PPP1R36Q96LQ0 422 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 RNF145Q96MT1 663 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ALPK1Q96QP1 1244 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PRPF18Q99633 342 aaKnown RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 KLHDC3Q9BQ90 382 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 BTBD2Q9BX70 525 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ROPN1BQ9BZX4 212 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 KLHL4Q9C0H6 718 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PIGUQ9H490 435 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 TMEM185BQ9H7F4 350 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms