RNA–Protein interactions for RNA: ENST00000547706.1

RPAP3-204, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 420 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-204	ENST00000547706	TRAPPC6A	O75865	159 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	ACTL6A	O96019	429 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	DBI	P07108	87 aa	Known RBP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	ARAF	P10398	606 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	ETS2	P15036	469 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	CD1E	P15812	388 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	ABO	P16442	354 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	RPS4Y1	P22090	263 aa	Known RBP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	CHM	P24386	653 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	DPP4	P27487	766 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	PTGS2	P35354	604 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	P2RX1	P51575	399 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	CHRNE	Q04844	493 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	FGFBP1	Q14512	234 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	SYPL1	Q16563	259 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	GCNT6	Q5T4J0	391 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	AAGAB	Q6PD74	315 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	GALNT10	Q86SR1	603 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	ANKFN1	Q8N957	763 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	B4GALNT2	Q8NHY0	566 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	BBS10	Q8TAM1	723 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	PHOSPHO1	Q8TCT1	267 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	ARSG	Q96EG1	525 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	HOPX	Q9BPY8	73 aa	Predicted RBP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	THUMPD3	Q9BV44	507 aa	Known RBP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	LAT2	Q9GZY6	243 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	DSN1	Q9H410	356 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	ARMC7	Q9H6L4	198 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	KAT8	Q9H7Z6	458 aa	Known RBP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	STOML1	Q9UBI4	398 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	IFT52	Q9Y366	437 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	HIVEP3	Q5T1R4	2406 aa		12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	PHF3	Q92576	2039 aa	Known RBP	12.83	□□□□□ -0.36
RPAP3-204	ENST00000547706	MYO7B	Q6PIF6	2116 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706		A0A1B0GTH9	108 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	C7orf72	A4D263	438 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	C2orf72	A6NCS6	295 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	C5orf58	C9J3I9	102 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	FAM47E-STBD1	D6RA91	191 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	GTPBP1	O00178	669 aa	Known RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	PRRG2	O14669	202 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	ZNF264	O43296	627 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	CDC40	O60508	579 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	SLC19A2	O60779	497 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	DNAJA2	O60884	412 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	ZIC2	O95409	532 aa	Predicted RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	C1QC	P02747	245 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	BCHE	P06276	602 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	THBS1	P07996	1170 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	CHRM4	P08173	479 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	UBL4A	P11441	157 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	GNLY	P22749	145 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	SLC6A2	P23975	617 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	PTGER4	P35408	488 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	EIF1	P41567	113 aa	Known RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	KCNJ10	P78508	379 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	LARS2	Q15031	903 aa	Known RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	TOMM20	Q15388	145 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	PDZK1	Q5T2W1	519 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	VASN	Q6EMK4	673 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	NANOGP8	Q6NSW7	305 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	REEP3	Q6NUK4	255 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	MTFR2	Q6P444	385 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	ENPP6	Q6UWR7	440 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	NET1	Q7Z628	596 aa	Predicted RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	IFNE	Q86WN2	208 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	KRT73	Q86Y46	540 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	CHERP	Q8IWX8	916 aa	Known RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	PM20D2	Q8IYS1	436 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	C11orf65	Q8NCR3	313 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	CCDC197	Q8NCU1	140 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	FAM57A	Q8TBR7	257 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	SLC35B4	Q969S0	331 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	RELT	Q969Z4	430 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	ZBTB8A	Q96BR9	441 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	C1GALT1C1	Q96EU7	318 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	TMEM19	Q96HH6	336 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	TREX2	Q9BQ50	279 aa	Predicted RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	SPATA5L1	Q9BVQ7	753 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	RTN4R	Q9BZR6	473 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	EXO5	Q9H790	373 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	EVA1A	Q9H8M9	152 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	NANOG	Q9H9S0	305 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	EXOSC3	Q9NQT5	275 aa	Known RBP	12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	TAS2R10	Q9NYW0	307 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	DKKL1	Q9UK85	242 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	FBXL2	Q9UKC9	423 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	ZNF232	Q9UNY5	417 aa		12.82	□□□□□ -0.36
RPAP3-204	ENST00000547706	FXYD1	O00168	92 aa		12.81	□□□□□ -0.36
RPAP3-204	ENST00000547706	HCRTR2	O43614	444 aa		12.81	□□□□□ -0.36
RPAP3-204	ENST00000547706	ZIC3	O60481	467 aa		12.81	□□□□□ -0.36
RPAP3-204	ENST00000547706	WDR1	O75083	606 aa		12.81	□□□□□ -0.36
RPAP3-204	ENST00000547706	CSTA	P01040	98 aa		12.81	□□□□□ -0.36
RPAP3-204	ENST00000547706	NID1	P14543	1247 aa		12.81	□□□□□ -0.36
RPAP3-204	ENST00000547706	GABRA1	P14867	456 aa		12.81	□□□□□ -0.36
RPAP3-204	ENST00000547706	IL7R	P16871	459 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms