RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 BLOC1S5-TXNDC5H3BN57 136 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 PSMD9O00233 223 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 HOXC11O43248 304 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-212ENST00000546744 KCNK2O95069 426 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 H2BFMP0C1H6 154 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 AKR1C4P17516 323 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 APEX1P27695 318 aaKnown RBP12.08□□□□□ -0.48
PTCH1-212ENST00000546744 GDNFP39905 211 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 MFSD13AQ14CX5 517 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 ZBTB37Q5TC79 503 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 POMZP3Q6PJE2 187 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 LYPD4Q6UWN0 246 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 ARFGAP1Q8N6T3 406 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 OR51A7Q8NH64 312 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 TAAR8Q969N4 342 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 ARMC5Q96C12 935 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 QRSL1Q9H0R6 528 aaKnown RBP12.08□□□□□ -0.48
PTCH1-212ENST00000546744 SEMA4GQ9NTN9 838 aa12.08□□□□□ -0.48
PTCH1-212ENST00000546744 A0A1B0GVT2 93 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 APODP05090 189 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 NAA10P41227 235 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 MEPCEQ7L2J0 689 aaKnown RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 NPAS4Q8IUM7 802 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 NRMQ8IXM6 262 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 RNF113BQ8IZP6 322 aaKnown RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 LSMEM1Q8N8F7 131 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 PAQR8Q8TEZ7 354 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SFXN2Q96NB2 322 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 EDIL3O43854 480 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 PRKCAP17252 672 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SERPINF1P36955 418 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 CLDN20P56880 219 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 NIPAL3Q6P499 406 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 LRRC25Q8N386 305 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 YIPF6Q96EC8 236 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SAMD11Q96NU1 681 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 MED18Q9BUE0 208 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 ACTRT3Q9BYD9 372 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SLC25A31Q9H0C2 315 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SPNS1Q9H2V7 528 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 IL36AQ9UHA7 158 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 A0A0U1RQF3 1178 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 B4DXG7 233 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 GPX2P18283 190 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SLC2A5P22732 501 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SLC1A3P43003 542 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 MLLT10P55197 1068 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 TOMM20Q15388 145 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 NADSYN1Q6IA69 706 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 CHADLQ6NUI6 762 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 FIP1L1Q6UN15 594 aaKnown RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 APOOLQ6UXV4 268 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SLC35F3Q8IY50 421 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SYNPRQ8TBG9 265 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 ADAMTS18Q8TE60 1221 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 LRRC46Q96FV0 321 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 APIPQ96GX9 242 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 TMEM175Q9BSA9 504 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF705FA8MVS1 300 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 KCNJ13O60928 360 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF623O75123 536 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 TPOP07202 933 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF705DP0CH99 300 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF705BP0CI00 300 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 PFKLP17858 780 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 GHRHRQ02643 423 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 TMEM115Q12893 351 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 TOR2AQ5JU69 321 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 UQCC3Q6UW78 93 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 FUNDC1Q8IVP5 155 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 SLC35F2Q8IXU6 374 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 C7orf61Q8IZ16 206 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 POC1BQ8TC44 478 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 UBTD2Q8WUN7 234 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 MRPL15Q9P015 296 aaKnown RBP12.07□□□□□ -0.48
PTCH1-212ENST00000546744 RBPJLQ9UBG7 517 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 ADAM18Q9Y3Q7 739 aa12.07□□□□□ -0.48
PTCH1-212ENST00000546744 C17orf113A0A1B0GUU1 675 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 TMEM82A0PJX8 343 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 GNRHRP30968 328 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 RAG2P55895 527 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 STK11Q15831 433 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 KCTD11Q693B1 232 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 NRSN1Q8IZ57 195 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 STEAP2Q8NFT2 490 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 OR4M1Q8NGD0 313 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 FAM46AQ96IP4 442 aaKnown RBP12.06□□□□□ -0.48
PTCH1-212ENST00000546744 TMEM43Q9BTV4 400 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 GABARAPL3Q9BY60 117 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 TSPAN10Q9H1Z9 355 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-212ENST00000546744 GALNT9Q9HCQ5 603 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 GPATCH2Q9NW75 528 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 B4GALT6Q9UBX8 382 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF629Q9UEG4 869 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-212ENST00000546744 SNRNP70P08621 437 aaKnown RBP12.06□□□□□ -0.48
PTCH1-212ENST00000546744 CNR1P21554 472 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 BLKP51451 505 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 CREB5Q02930 508 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 C3orf33Q6P1S2 294 aa12.06□□□□□ -0.48
PTCH1-212ENST00000546744 SFXN4Q6P4A7 337 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms