RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SNTA1Q13424 505 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 EXOSC2Q13868 293 aaKnown RBP13.69□□□□□ -0.22
HOXC11-202ENST00000546378 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
HOXC11-202ENST00000546378 YOD1Q5VVQ6 348 aaPredicted RBP13.69□□□□□ -0.22
HOXC11-202ENST00000546378 FAM46CQ5VWP2 391 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 BMPERQ8N8U9 685 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 DNAAF1Q8NEP3 725 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 OR13C2Q8NGS9 318 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 SETD6Q8TBK2 473 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 PHOSPHO2Q8TCD6 241 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 OR51J1Q9H342 316 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 SLC25A19Q9HC21 320 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 STARD5Q9NSY2 213 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 TMEM45AQ9NWC5 275 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 TAS2R7Q9NYW3 318 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 ATP6V1G2-DDX39BF2Z307 99 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 APOC3P02656 99 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 MPC1LP0DKB6 136 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 TFPIP10646 304 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 C6P13671 934 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 EVX1P49640 407 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 SLC7A9P82251 487 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 SNTB2Q13425 540 aaKnown RBP13.69□□□□□ -0.22
HOXC11-202ENST00000546378 DEFB134Q4QY38 66 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 ENTPD8Q5MY95 495 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 HTR3DQ70Z44 454 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 AMZ2Q86W34 360 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 FAM219AQ8IW50 185 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 LINC00471Q8N535 108 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 OR4E2Q8NGC2 313 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 TEX12Q9BXU0 123 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 GNG8Q9UK08 70 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 REV3LO60673 3130 aa13.69□□□□□ -0.22
HOXC11-202ENST00000546378 PRRC2CQ9Y520 2896 aaKnown RBP13.68□□□□□ -0.22
HOXC11-202ENST00000546378 LDB3O75112 727 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 ADRB1P08588 477 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 SLC35G4P0C7Q5 338 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 DEFA5Q01523 94 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 ZNF770Q6IQ21 691 aaPredicted RBP13.68□□□□□ -0.22
HOXC11-202ENST00000546378 PARGQ86W56 976 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 FBXO15Q8NCQ5 510 aaPredicted RBP13.68□□□□□ -0.22
HOXC11-202ENST00000546378 SDR9C7Q8NEX9 313 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 CDS1Q92903 461 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 IRF7Q92985 503 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 NUS1Q96E22 293 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 TMEM43Q9BTV4 400 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 ARPC1BO15143 372 aaKnown RBP13.68□□□□□ -0.22
HOXC11-202ENST00000546378 MOSPD3O75425 235 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 UBXN7O94888 489 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 HPXP02790 462 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 ALPPP05187 535 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 ACP2P11117 423 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 PDX1P52945 283 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 Q6ZNB5 142 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 NUDT13Q86X67 352 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 MEIOBQ8N635 442 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 PTCHD1Q96NR3 888 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 C20orf141Q9NUB4 165 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 FBXO34Q9NWN3 711 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 KLHL28Q9NXS3 571 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 FBXL3Q9UKT7 428 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 CACNG2Q9Y698 323 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 IGLON5A6NGN9 336 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 RFPL3O75679 317 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 SPDEFO95238 335 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 STX4Q12846 297 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 ZNF687Q8N1G0 1237 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 OR56A3Q8NH54 315 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 TMEM163Q8TC26 289 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 PDXPQ96GD0 296 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 COQ10AQ96MF6 247 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 LRRC3BQ96PB8 259 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 DIMT1Q9UNQ2 313 aaKnown RBP13.68□□□□□ -0.22
HOXC11-202ENST00000546378 CA5BQ9Y2D0 317 aa13.68□□□□□ -0.22
HOXC11-202ENST00000546378 M0R233 179 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 PI15O43692 258 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 SLC22A5O76082 557 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 PPP1R3DO95685 299 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 ANXA7P20073 488 aaKnown RBP13.67□□□□□ -0.22
HOXC11-202ENST00000546378 FAM198BQ6UWH4 519 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 CBARPQ8N350 705 aaPredicted RBP13.67□□□□□ -0.22
HOXC11-202ENST00000546378 LRIG1Q96JA1 1093 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 KCNN2Q9H2S1 579 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 ZMAT3Q9HA38 289 aaKnown RBP13.67□□□□□ -0.22
HOXC11-202ENST00000546378 SPHK2Q9NRA0 654 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 KLK11Q9UBX7 282 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 FAM25EA8MYX2 175 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 CHP2O43745 196 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 FZD7O75084 574 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 OLFM2O95897 454 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 SOD1P00441 154 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 C1QBP02746 253 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 ANXA3P12429 323 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 CPEP16870 476 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 RPS5P46782 204 aaKnown RBP13.67□□□□□ -0.22
HOXC11-202ENST00000546378 SELENOPP49908 381 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 SP140Q13342 867 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 ESCO2Q56NI9 601 aa13.67□□□□□ -0.22
HOXC11-202ENST00000546378 LINC00299Q6ZSB3 139 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms