RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 KCNH1O95259 989 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 PF4P02776 101 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 OPN1LWP04000 364 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 SHBGP04278 402 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 THBDP07204 575 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 IFI6P09912 130 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 UROSP10746 265 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 ACP2P11117 423 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 CPA3P15088 417 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 TBXA2RP21731 343 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 PRPH2P23942 346 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 CRHR1P34998 444 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 PRKAG1P54619 331 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 RPS3AP61247 264 aaKnown RBP7.59□□□□□ -1.19
USP28-215ENST00000545608 NAA20P61599 178 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 OCRLQ01968 901 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 SGCBQ16585 318 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.59□□□□□ -1.19
USP28-215ENST00000545608 CFAP157Q5JU67 520 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 Q5PR19 223 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 CLEC9AQ6UXN8 241 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 IKBIPQ70UQ0 350 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 FAM214BQ7L5A3 538 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 ZAR1Q86SH2 424 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 P3H2Q8IVL5 708 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 LRRC75A-AS1Q8N1F1 130 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 CIARTQ8N365 385 aaPredicted RBP7.59□□□□□ -1.19
USP28-215ENST00000545608 CEP112Q8N8E3 955 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 GATSQ8NAP1 163 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 NUP43Q8NFH3 380 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 OR2T11Q8NH01 316 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 FBXO30Q8TB52 745 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 FAM110BQ8TC76 370 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 GPR151Q8TDV0 419 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 SLC9A6Q92581 669 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 PIGTQ969N2 578 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 GIMAP5Q96F15 307 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 METTL2AQ96IZ6 378 aaKnown RBP7.59□□□□□ -1.19
USP28-215ENST00000545608 EAF1Q96JC9 268 aaPredicted RBP7.59□□□□□ -1.19
USP28-215ENST00000545608 FCRL1Q96LA6 429 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 PIP5K1AQ99755 562 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 KLHL4Q9C0H6 718 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 TUBB1Q9H4B7 451 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 UBTD1Q9HAC8 227 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 LRTM1Q9HBL6 345 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 PLSCR4Q9NRQ2 329 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 FBXO34Q9NWN3 711 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 OXSMQ9NWU1 459 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 BAIAP2L1Q9UHR4 511 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 CLEC4AQ9UMR7 237 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 VDAC3Q9Y277 283 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 FIS1Q9Y3D6 152 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 PCNX3Q9H6A9 2034 aa7.59□□□□□ -1.19
USP28-215ENST00000545608 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 A0A1W2PRB8 838 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 PDPK1O15530 556 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 KLF4O43474 513 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 RGS14O43566 566 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 CXCL13O43927 109 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 TBX19O60806 448 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 OXSR1O95747 527 aaPredicted RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 LY6G6DO95868 133 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 SDC1P18827 310 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 EFNA1P20827 205 aaPredicted RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 FPR1P21462 350 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 PSMA4P25789 261 aaKnown RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 FRKP42685 505 aaPredicted RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 CCT5P48643 541 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 MANFP55145 182 aaKnown RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 FGFBP1Q14512 234 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 DUSP5Q16690 384 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 EXOC3L2Q2M3D2 409 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 CTU2Q2VPK5 515 aaKnown RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 CCDC153Q494R4 210 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 RFTN2Q52LD8 501 aaPredicted RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 PPP4R4Q6NUP7 873 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 C10orf107Q8IVU9 208 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 CDRT4Q8N9R6 151 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 CCDC63Q8NA47 563 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 SLC16A11Q8NCK7 471 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 LRRN4CLQ8ND94 238 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 OR10D3Q8NH80 312 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 CEP70Q8NHQ1 597 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 CLHC1Q8NHS4 586 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 PPP1R14CQ8TAE6 165 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 POC1BQ8TC44 478 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 PPCDCQ96CD2 204 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 ARSGQ96EG1 525 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 OTUB1Q96FW1 271 aaPredicted RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 C16orf58Q96GQ5 468 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 ZNF764Q96H86 408 aaPredicted RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 ADGRG7Q96K78 797 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 Q96MF0 132 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 TSSK3Q96PN8 268 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 GATA5Q9BWX5 397 aaPredicted RBP7.58□□□□□ -1.2
USP28-215ENST00000545608 PRRG4Q9BZD6 226 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 REEP4Q9H6H4 257 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 MED17Q9NVC6 651 aa7.58□□□□□ -1.2
USP28-215ENST00000545608 C1orf109Q9NX04 203 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms