RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 OR2M5A3KFT3 312 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 CLCA1A8K7I4 914 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 H3BML4 177 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 GTPBP1O00178 669 aaKnown RBP14.22□□□□□ -0.13
CCDC78-216ENST00000544996 SASH3O75995 380 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 BMP5P22003 454 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 KHKP50053 298 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 ANXA11P50995 505 aaKnown RBP14.22□□□□□ -0.13
CCDC78-216ENST00000544996 CASP9P55211 416 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 STX1BP61266 288 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 ARHGAP11BQ3KRB8 267 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 SAXO2Q658L1 398 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 ARSKQ6UWY0 536 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 MEX3BQ6ZN04 569 aaKnown RBP14.22□□□□□ -0.13
CCDC78-216ENST00000544996 LIX1LQ8IVB5 337 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 MCEMP1Q8IX19 187 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 UBQLNLQ8IYU4 475 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF614Q8N883 585 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 OR5M1Q8NGP8 315 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 XAGE5Q8WWM1 108 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 ZBTB8AQ96BR9 441 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 LRRC46Q96FV0 321 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 MAGEB18Q96M61 343 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 NMUR2Q9GZQ4 415 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 ENKD1Q9H0I2 346 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 RMND5AQ9H871 391 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 VDAC3Q9Y277 283 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF337Q9Y3M9 751 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 DTNAQ9Y4J8 743 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 AP4B1Q9Y6B7 739 aa14.22□□□□□ -0.13
CCDC78-216ENST00000544996 NPIPA5A0A0B4J1W7 369 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 KDM4EB2RXH2 506 aaPredicted RBP14.21□□□□□ -0.13
CCDC78-216ENST00000544996 NPIPA7E9PJI5 369 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 RFXANKO14593 260 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 NPIPA8P0DM63 369 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 OR12D1P0DN82 309 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF17P17021 662 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 OPRM1P35372 400 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 IDH3AP50213 366 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 TXNL4AP83876 142 aaKnown RBP14.21□□□□□ -0.13
CCDC78-216ENST00000544996 TFF3Q07654 80 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 GPR68Q15743 365 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 CD226Q15762 336 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 TNFAIP8L2Q6P589 184 aaPredicted RBP14.21□□□□□ -0.13
CCDC78-216ENST00000544996 GRAMD2AQ8IUY3 354 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 NAXEQ8NCW5 288 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 CKAP2Q8WWK9 683 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 RAB8BQ92930 207 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 WNT2BQ93097 391 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 ZFP3Q96NJ6 502 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 UCN2Q96RP3 112 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 INPP5KQ9BT40 448 aa14.21□□□□□ -0.13
CCDC78-216ENST00000544996 NPIPB9F8W1W9 429 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 SEC14L5O43304 696 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 ANP32DO95626 131 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 KRT75O95678 551 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 NUDT14O95848 222 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 GSNP06396 782 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 CTSSP25774 331 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 POLR2JP52435 117 aaKnown RBP14.2□□□□□ -0.14
CCDC78-216ENST00000544996 AQP5P55064 265 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 RPS3AP61247 264 aaKnown RBP14.2□□□□□ -0.14
CCDC78-216ENST00000544996 HPCAP84074 193 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 ZNF117Q03924 483 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 TMEM44Q2T9K0 475 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 HEPHL1Q6MZM0 1159 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 MSANTD1Q6ZTZ1 278 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 P4HA3Q7Z4N8 544 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 GDF7Q7Z4P5 450 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 ADGRE4PQ86SQ3 457 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 RNF130Q86XS8 419 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 GTPBP8Q8N3Z3 284 aaPredicted RBP14.2□□□□□ -0.14
CCDC78-216ENST00000544996 ITCHQ96J02 903 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 CCDC28BQ9BUN5 200 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 ZNF350Q9GZX5 532 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 SLC24A3Q9HC58 644 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 NPDC1Q9NQX5 325 aaPredicted RBP14.2□□□□□ -0.14
CCDC78-216ENST00000544996 POLE3Q9NRF9 147 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 MED17Q9NVC6 651 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 CLCF1Q9UBD9 225 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 MKLN1Q9UL63 735 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 CARD8Q9Y2G2 431 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 PCNX1Q96RV3 2341 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 UNC79Q9P2D8 2635 aa14.2□□□□□ -0.14
CCDC78-216ENST00000544996 PHF3Q92576 2039 aaKnown RBP14.19□□□□□ -0.14
CCDC78-216ENST00000544996 FAM234BA2RU67 622 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 C7orf72A4D263 438 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 SLC22A20A6NK97 555 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 FCMRO60667 390 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 RCBTB2O95199 551 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 IL18BPO95998 194 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 GUSBP08236 651 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 TMIGD3P0DMS9 266 aaPredicted RBP14.19□□□□□ -0.14
CCDC78-216ENST00000544996 ME2P23368 584 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 EIF1P41567 113 aaKnown RBP14.19□□□□□ -0.14
CCDC78-216ENST00000544996 CDKN2CP42773 168 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 P2RX1P51575 399 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 ZNF136P52737 540 aa14.19□□□□□ -0.14
CCDC78-216ENST00000544996 SUMO3P55854 103 aaPredicted RBP14.19□□□□□ -0.14
CCDC78-216ENST00000544996 EEF1A1P68104 462 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms