RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 C2orf27AQ580R0 203 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 ZMAT1Q5H9K5 638 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 GARNL3Q5VVW2 1013 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 FIGLAQ6QHK4 219 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 SMARCD3Q6STE5 483 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 ENPP7Q6UWV6 458 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 BAIAP2L2Q6UXY1 529 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 TMEM184AQ6ZMB5 413 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 RTL4Q6ZR62 310 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 NOXA1Q86UR1 476 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 GRAMD2AQ8IUY3 354 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 TRIM48Q8IWZ4 208 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 OR4F15Q8NGB8 312 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 KLK6Q92876 244 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 ZG16BQ96DA0 208 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 NEDD4LQ96PU5 975 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 MACROD1Q9BQ69 325 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 ALG8Q9BVK2 526 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 TMED9Q9BVK6 235 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 TRIM2Q9C040 744 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 NIPAL2Q9H841 368 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 FGF22Q9HCT0 170 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 MRPL39Q9NYK5 338 aaKnown RBP12.13□□□□□ -0.47
CPSF7-223ENST00000544669 TBC1D29Q9UFV1 150 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 NPFFR2Q9Y5X5 522 aa12.13□□□□□ -0.47
CPSF7-223ENST00000544669 CDHR4A6H8M9 788 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 ANKRD61A6NGH8 418 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 GTPBP1O00178 669 aaKnown RBP12.12□□□□□ -0.47
CPSF7-223ENST00000544669 LYRM1O43325 122 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 LATO43561 262 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 PLPP2O43688 288 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 IFI30P13284 250 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 RBMS1P29558 406 aaKnown RBP12.12□□□□□ -0.47
CPSF7-223ENST00000544669 ACSL1P33121 698 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF136P52737 540 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 PSMD4P55036 377 aaKnown RBP12.12□□□□□ -0.47
CPSF7-223ENST00000544669 BTG1P62324 171 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 POU6F2P78424 691 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-223ENST00000544669 PITPNAQ00169 270 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 GPR68Q15743 365 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 HSD17B12Q53GQ0 312 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 ARHGAP11AQ6P4F7 1023 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 FAM111BQ6SJ93 734 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 KLBQ86Z14 1044 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 GALNT12Q8IXK2 581 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 OR5M3Q8NGP4 307 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 OIT3Q8WWZ8 545 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 PHYHIPQ92561 330 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 CREB3L1Q96BA8 519 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 ERLEC1Q96DZ1 483 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 FCRL4Q96PJ5 515 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 MYADMQ96S97 322 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 KCNJ15Q99712 375 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF649Q9BS31 505 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 HDHD5Q9BXW7 423 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 RERGLQ9H628 205 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 HINT3Q9NQE9 182 aaKnown RBP12.12□□□□□ -0.47
CPSF7-223ENST00000544669 POT1Q9NUX5 634 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF223Q9UK11 482 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-223ENST00000544669 PLEKHM1Q9Y4G2 1056 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 NOX1Q9Y5S8 564 aa12.12□□□□□ -0.47
CPSF7-223ENST00000544669 PRR23AA6NEV1 266 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 C12orf71A8MTZ7 269 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 BTN3A3O00478 584 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 BHLHE40O14503 412 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 SLC31A1O15431 190 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 FRS3O43559 492 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 CH25HO95992 272 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 CD1AP06126 327 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 SLC6A6P31641 620 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 NR4A2P43354 598 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 RFX3P48380 749 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 SF3B4Q15427 424 aaKnown RBP eCLIP12.11□□□□□ -0.471e-9■■■■■ 29.1
CPSF7-223ENST00000544669 LTB4RQ15722 352 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 DEFB134Q4QY38 66 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 FHL5Q5TD97 284 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 ZNF550Q7Z398 422 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 OOSP2Q86WS3 158 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 PLCZ1Q86YW0 608 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 SLC44A3Q8N4M1 653 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 SYT14Q8NB59 555 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 OR51G2Q8NGK0 314 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 OR5W2Q8NH69 310 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 HAVCR2Q8TDQ0 301 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 BPIFA2Q96DR5 249 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 CMTM3Q96MX0 182 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 CCNL2Q96S94 520 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-223ENST00000544669 PRSS27Q9BQR3 290 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 MARVELD1Q9BSK0 173 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 ACTR10Q9NZ32 417 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 PILRAQ9UKJ1 303 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 LRRC72A6NJI9 287 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 K7EQS6 105 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 TFECO14948 347 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-223ENST00000544669 PLA2G10O15496 165 aa12.11□□□□□ -0.47
CPSF7-223ENST00000544669 CHP2O43745 196 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms