RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 RPS4Y1P22090 263 aaKnown RBP13.71□□□□□ -0.21
CD9-210ENST00000543916 TCEA1P23193 301 aaKnown RBP13.71□□□□□ -0.21
CD9-210ENST00000543916 DPP4P27487 766 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 SRD5A2P31213 254 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 CRISP3P54108 245 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 DSCR4P56555 118 aaPredicted RBP13.71□□□□□ -0.21
CD9-210ENST00000543916 PLAURQ03405 335 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 FGFBP1Q14512 234 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 ADRM1Q16186 407 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 RABL3Q5HYI8 236 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 GCNT6Q5T4J0 391 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 GKAP1Q5VSY0 366 aaPredicted RBP13.71□□□□□ -0.21
CD9-210ENST00000543916 NANOGP8Q6NSW7 305 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 ARHGAP11AQ6P4F7 1023 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 CBLN3Q6UW01 205 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 MTERF4Q7Z6M4 381 aaKnown RBP13.71□□□□□ -0.21
CD9-210ENST00000543916 MISPQ8IVT2 679 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 PCYOX1LQ8NBM8 494 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 OR14L1PQ8NHC6 308 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 NFKBIDQ8NI38 313 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 C1GALT1C1Q96EU7 318 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 THUMPD3Q9BV44 507 aaKnown RBP13.71□□□□□ -0.21
CD9-210ENST00000543916 EXO5Q9H790 373 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 KAT8Q9H7Z6 458 aaKnown RBP13.71□□□□□ -0.21
CD9-210ENST00000543916 NANOGQ9H9S0 305 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 TAS2R10Q9NYW0 307 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 DKKL1Q9UK85 242 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 CARD8Q9Y2G2 431 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 SLC6A5Q9Y345 797 aa13.71□□□□□ -0.21
CD9-210ENST00000543916 AGAP5A6NIR3 686 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 CLDN24A6NM45 220 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 H3BNH8 94 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 AQP7O14520 342 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 AIM2O14862 343 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 ZIC3O60481 467 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 BCAS1O75363 584 aaPredicted RBP13.7□□□□□ -0.22
CD9-210ENST00000543916 DCTN3O75935 186 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 UBL4AP11441 157 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 ABOP16442 354 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 PRDX6P30041 224 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 PTGS2P35354 604 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 RBPJQ06330 500 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 ZNF630Q2M218 657 aaPredicted RBP13.7□□□□□ -0.22
CD9-210ENST00000543916 ARSKQ6UWY0 536 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 Q6ZPB1 254 aaPredicted RBP13.7□□□□□ -0.22
CD9-210ENST00000543916 PTOV1Q86YD1 416 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 B4GALNT2Q8NHY0 566 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 OIT3Q8WWZ8 545 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 ARSGQ96EG1 525 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 LRRC37BQ96QE4 947 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 TREX2Q9BQ50 279 aaPredicted RBP13.7□□□□□ -0.22
CD9-210ENST00000543916 TMEM38AQ9H6F2 299 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 PTGES2Q9H7Z7 377 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 MTHFD2LQ9H903 347 aaPredicted RBP13.7□□□□□ -0.22
CD9-210ENST00000543916 GID8Q9NWU2 228 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 CALML5Q9NZT1 146 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 SUCOQ9UBS9 1254 aaKnown RBP13.7□□□□□ -0.22
CD9-210ENST00000543916 MRPS18CQ9Y3D5 142 aaKnown RBP13.7□□□□□ -0.22
CD9-210ENST00000543916 ZNF407Q9C0G0 2248 aa13.7□□□□□ -0.22
CD9-210ENST00000543916 ZGRF1Q86YA3 2104 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 A0A0G2JPF8 293 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 TMEM247A6NEH6 219 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 HNRNPCL2B2RXH8 293 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 HNRNPCL3B7ZW38 293 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 NPIPA2E9PIF3 369 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 NPIPA3F8WFD2 350 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 GTPBP1O00178 669 aaKnown RBP13.69□□□□□ -0.22
CD9-210ENST00000543916 ZNF264O43296 627 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 HCRTR2O43614 444 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 HNRNPCL1O60812 293 aaKnown RBP13.69□□□□□ -0.22
CD9-210ENST00000543916 CSTAP01040 98 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 STSP08842 583 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 HNRNPCL4P0DMR1 293 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 HK1P19367 917 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 MSX1P28360 303 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 ADH7P40394 386 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 GZMMP51124 257 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 GFRA1P56159 465 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 B3GALT5-AS1P59052 145 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 CDK6Q00534 326 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 CRYZQ08257 329 aaKnown RBP13.69□□□□□ -0.22
CD9-210ENST00000543916 SKP2Q13309 424 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 GANABQ14697 944 aaKnown RBP13.69□□□□□ -0.22
CD9-210ENST00000543916 C3AR1Q16581 482 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 DCST1Q5T197 706 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 PRAMEF8Q5VWM4 474 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 C1QL3Q5VWW1 255 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 PRAMEF7Q5VXH5 474 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 NET1Q7Z628 596 aaPredicted RBP13.69□□□□□ -0.22
CD9-210ENST00000543916 VRK2Q86Y07 508 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 CCDC197Q8NCU1 140 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 OR8J3Q8NGG0 315 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 FAM57AQ8TBR7 257 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 PMM1Q92871 262 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 CMTM5Q96DZ9 223 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 NPAS1Q99742 590 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 HHATLQ9HCP6 504 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 BCL2L10Q9HD36 194 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms