RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 UAP1L1Q3KQV9 507 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ARHGAP11BQ3KRB8 267 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CLEC12AQ5QGZ9 265 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TBC1D3GQ6DHY5 549 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TYW3Q6IPR3 259 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC30A6Q6NXT4 461 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PLEKHM3Q6ZWE6 761 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 REC114Q7Z4M0 266 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 VN1R4Q7Z5H5 301 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 LHFPL3Q86UP9 236 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PAQR7Q86WK9 346 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 LSRQ86X29 649 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MARCH9Q86YJ5 346 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NRMQ8IXM6 262 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 OR2L13Q8N349 312 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 Q8N402 240 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 KLHL36Q8N4N3 616 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CAMKK1Q8N5S9 505 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZFP41Q8N8Y5 198 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 BBS1Q8NFJ9 593 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NT5CQ8TCD5 201 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SPRYD4Q8WW59 207 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ACOT12Q8WYK0 555 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC41A3Q96GZ6 507 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SMIM10Q96HG1 83 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MS4A4EQ96PG1 132 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 GAS2L1Q99501 681 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MCHR1Q99705 422 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PRSS27Q9BQR3 290 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MARVELD1Q9BSK0 173 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 YIPF2Q9BWQ6 316 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TEX12Q9BXU0 123 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 IRF2BPLQ9H1B7 796 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TTYH1Q9H313 450 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 UBQLN3Q9H347 655 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FN3KQ9H479 309 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLA2Q9H6Q3 261 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 KIR3DX1Q9H7L2 352 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TRIM45Q9H8W5 580 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MTHFD2LQ9H903 347 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MARCH7Q9H992 704 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RANGRFQ9HD47 186 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 B3GAT2Q9NPZ5 323 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 HINT3Q9NQE9 182 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 DDX28Q9NUL7 540 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 IMP3Q9NV31 184 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RBFOX1Q9NWB1 397 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 KLHL28Q9NXS3 571 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SPHK1Q9NYA1 384 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NLGN3Q9NZ94 848 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 KCMF1Q9P0J7 381 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SERGEFQ9UGK8 458 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NUFIP1Q9UHK0 495 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 DPP7Q9UHL4 492 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 GPN3Q9UHW5 284 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 KLF15Q9UIH9 416 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF223Q9UK11 482 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC13A4Q9UKG4 626 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CLCA2Q9UQC9 943 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 KCNK6Q9Y257 313 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF443Q9Y2A4 671 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 NTNG1Q9Y2I2 539 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RWDD3Q9Y3V2 267 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PLEKHM1Q9Y4G2 1056 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TRPM6Q9BX84 2022 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SMIM30A4D0T7 59 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 LINC01553A4QN01 128 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ANKRD34BA5PLL1 514 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 OR52A4PA6NMU1 304 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 GTPBP1O00178 669 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 BHLHE40O14503 412 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SOCS6O14544 535 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CDC42EP2O14613 210 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 LATO43561 262 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PIP5K1CO60331 668 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC19A2O60779 497 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC43A1O75387 559 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC2A10O95528 541 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CSF2P04141 144 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ASGR2P07307 311 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC2A2P11168 524 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CELP19835 753 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TBXA2RP21731 343 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CMPK1P30085 196 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 GJA4P35212 333 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 GPR4P46093 362 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 AVPR1BP47901 424 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MTNR1BP49286 362 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CLDN20P56880 219 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RGS8P57771 180 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FXYD6P3P58550 94 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RAB8AP61006 207 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 STXBP1P61764 594 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SHC2P98077 582 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TNFRSF17Q02223 184 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TNP2Q05952 138 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 DUSP8Q13202 625 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 LRRC32Q14392 662 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 QPRTQ15274 297 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms