RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 CAMK2AQ9UQM7 478 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 CELSR2Q9HCU4 2923 aa11.87□□□□□ -0.51
LTBR-208ENST00000541005 ADGRG4Q8IZF6 3080 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 FAM234BA2RU67 622 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 MBD3L4A6NDZ8 208 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 MBD3L3A6NE82 208 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 MBD3L5A6NJ08 208 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 CYSRT1A8MQ03 144 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 KIAA0513O60268 411 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 EDF1O60869 148 aaKnown RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 STX11O75558 287 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 TOXO94900 526 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 ZCCHC18P0CG32 403 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 CEACAM8P31997 349 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 CHI3L1P36222 383 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 ATP4BP51164 291 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 POLR2JP52435 117 aaKnown RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 AQP5P55064 265 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 SUMO3P55854 103 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 TFF3Q07654 80 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 FUT5Q11128 374 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 RCAN2Q14206 197 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 ZNF141Q15928 474 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 FLYWCH1Q4VC44 716 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.86□□□□□ -0.51
LTBR-208ENST00000541005 CCDC71Q8IV32 467 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 MBD3L2Q8NHZ7 208 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 PIGQQ9BRB3 760 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 SIKE1Q9BRV8 207 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 ALKBH4Q9NXW9 302 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 RPH3AQ9Y2J0 694 aaPredicted RBP11.86□□□□□ -0.51
LTBR-208ENST00000541005 DTNAQ9Y4J8 743 aa11.86□□□□□ -0.51
LTBR-208ENST00000541005 OR2M5A3KFT3 312 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 HSPB2A8KAH6 182 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 KDM4EB2RXH2 506 aaPredicted RBP11.85□□□□□ -0.51
LTBR-208ENST00000541005 H0Y3Z8 333 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 H3BNH8 94 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 HMGN4O00479 90 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 RFXANKO14593 260 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 HNRNPRO43390 633 aaKnown RBP11.85□□□□□ -0.51
LTBR-208ENST00000541005 HCRTR2O43614 444 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 PEPDP12955 493 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 IGFBP2P18065 325 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 ANXA11P50995 505 aaKnown RBP11.85□□□□□ -0.51
LTBR-208ENST00000541005 STX1BP61266 288 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 HSPB2Q16082 182 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 PLPPR5Q32ZL2 321 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 SLC25A35Q3KQZ1 300 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 TIGD2Q4W5G0 525 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 ATAD3BQ5T9A4 648 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 RAET1LQ5VY80 246 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 TNFAIP8L2Q6P589 184 aaPredicted RBP11.85□□□□□ -0.51
LTBR-208ENST00000541005 ARSKQ6UWY0 536 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 C16orf62Q7Z3J2 963 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 RNF130Q86XS8 419 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 GTPBP8Q8N3Z3 284 aaPredicted RBP11.85□□□□□ -0.51
LTBR-208ENST00000541005 GATSQ8NAP1 163 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 ZBTB8AQ96BR9 441 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 ITCHQ96J02 903 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 ZFP3Q96NJ6 502 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 TREX2Q9BQ50 279 aaPredicted RBP11.85□□□□□ -0.51
LTBR-208ENST00000541005 TUBA1CQ9BQE3 449 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 SAP130Q9H0E3 1048 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 RMND5AQ9H871 391 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 SLC6A13Q9NSD5 602 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 CLCF1Q9UBD9 225 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 ICAM5Q9UMF0 924 aa11.85□□□□□ -0.51
LTBR-208ENST00000541005 NPIPA5A0A0B4J1W7 369 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 NPIPA7E9PJI5 369 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 C19orf84I3L1E1 186 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 DNAJA2O60884 412 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 TNFRSF21O75509 655 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 KRT75O95678 551 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 C1QCP02747 245 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 NPIPA8P0DM63 369 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 OR12D1P0DN82 309 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 HOXB9P17482 250 aaPredicted RBP11.84□□□□□ -0.51
LTBR-208ENST00000541005 POU3F2P20265 443 aaPredicted RBP11.84□□□□□ -0.51
LTBR-208ENST00000541005 PSMA4P25789 261 aaKnown RBP11.84□□□□□ -0.51
LTBR-208ENST00000541005 STARP49675 285 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 MVDP53602 400 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 ZNF117Q03924 483 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 SP5Q6BEB4 398 aaPredicted RBP11.84□□□□□ -0.51
LTBR-208ENST00000541005 TYW3Q6IPR3 259 aaKnown RBP11.84□□□□□ -0.51
LTBR-208ENST00000541005 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 ARFGAP2Q8N6H7 521 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 NAXEQ8NCW5 288 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 TOR1AIP2Q8NFQ8 470 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 TNIP2Q8NFZ5 429 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 OR10Q1Q8NGQ4 319 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 B4GALNT2Q8NHY0 566 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 PHOSPHO1Q8TCT1 267 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 ZFP90Q8TF47 636 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 RAB8BQ92930 207 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 ROPN1LQ96C74 230 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 ENKD1Q9H0I2 346 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 MED4Q9NPJ6 270 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 MED17Q9NVC6 651 aa11.84□□□□□ -0.51
LTBR-208ENST00000541005 KCNE5Q9UJ90 142 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms