RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RCAN2Q14206 197 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 GSTA3Q16772 222 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 PGS1Q32NB8 556 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 VPS26BQ4G0F5 336 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 TIGD3Q6B0B8 471 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 VWA1Q6PCB0 445 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 EPGNQ6UW88 154 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 SZRD1Q7Z422 152 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 OR8J2Q8NGG1 315 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 PSMA8Q8TAA3 256 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 MOAP1Q96BY2 351 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 DACH2Q96NX9 599 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 NTMQ9P121 344 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 OR10H1Q9Y4A9 318 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 MXRA5Q9NR99 2828 aa13.5□□□□□ -0.25
USB1-203ENST00000539737 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 H0YC42 278 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 RNASET2O00584 256 aaKnown RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 ANKRD28O15084 1053 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 UBDO15205 165 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 EMC8O43402 210 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 TNFSF13O75888 250 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 SMNDC1O75940 238 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■■□ 22.6
USB1-203ENST00000539737 CT45A8P0DMV1 189 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 CT45A9P0DMV2 189 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 EFNA1P20827 205 aaPredicted RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 TPD52P55327 224 aaPredicted RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 CORO7P57737 925 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 SIRPAP78324 504 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 EFR3AQ14156 821 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 PDCD4Q53EL6 469 aaKnown RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 CT45A2Q5DJT8 189 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 NHSL2Q5HYW2 709 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 ANXA8L1Q5VT79 327 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 ANKRD34AQ69YU3 496 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 OR5M10Q6IEU7 315 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 TMEM81Q6P7N7 255 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 SLC44A2Q8IWA5 706 aaPredicted RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 CDRT4Q8N9R6 151 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 GLB1L3Q8NCI6 653 aaPredicted RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 VPS37AQ8NEZ2 397 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 NUP43Q8NFH3 380 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 OR56A1Q8NGH5 318 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 SFXN5Q8TD22 340 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 STON2Q8WXE9 905 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 NANOS1Q8WY41 292 aaKnown RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 HGDQ93099 445 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 COL21A1Q96P44 957 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 OR52B2Q96RD2 323 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 CCL19Q99731 98 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 SIKE1Q9BRV8 207 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 LMF2Q9BU23 707 aaKnown RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 OPN3Q9H1Y3 402 aaPredicted RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 CALHM2Q9HA72 323 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 Q9N2J8 555 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 TCF7L2Q9NQB0 619 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 ZCCHC3Q9NUD5 404 aaKnown RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 CLCF1Q9UBD9 225 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 GPR45Q9Y5Y3 372 aa13.49□□□□□ -0.25
USB1-203ENST00000539737 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
USB1-203ENST00000539737 PRAMEF25A6NGN4 478 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 OR6C70A6NIJ9 312 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 CFLARO15519 480 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 EDF1O60869 148 aaKnown RBP13.48□□□□□ -0.25
USB1-203ENST00000539737 ICOSLGO75144 302 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 CBR3O75828 277 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 C6orf47O95873 294 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 IL18BPO95998 194 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 PRIM2P49643 509 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 AQP5P55064 265 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 STX1BP61266 288 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 PSG6Q00889 435 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 SPDYE7PQ495Y7 208 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 CYP27C1Q4G0S4 372 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 OR4F3Q6IEY1 312 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 ZCCHC12Q6PEW1 402 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 BHLHB9Q6PI77 547 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 ENPP6Q6UWR7 440 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 NPSR1Q6W5P4 371 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 WDSUB1Q8N9V3 476 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 OR14L1PQ8NHC6 308 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 TMBIM1Q969X1 311 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 NTNG2Q96CW9 530 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 FAM120BQ96EK7 910 aaKnown RBP13.48□□□□□ -0.25
USB1-203ENST00000539737 SLC35A4Q96G79 324 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 EQTNQ9NQ60 294 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 SIRT3Q9NTG7 399 aaPredicted RBP13.48□□□□□ -0.25
USB1-203ENST00000539737 FAM120CQ9NX05 1096 aaKnown RBP13.48□□□□□ -0.25
USB1-203ENST00000539737 ZIM2Q9NZV7 527 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 MRTO4Q9UKD2 239 aaKnown RBP13.48□□□□□ -0.25
USB1-203ENST00000539737 PCDHGB4Q9UN71 923 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 SNX8Q9Y5X2 465 aa13.48□□□□□ -0.25
USB1-203ENST00000539737 A0A1W2PNV4 684 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 A8MXE2 369 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 CASKO14936 926 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 ARHGEF9O43307 516 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 UGT2B11O75310 529 aa13.47□□□□□ -0.25
USB1-203ENST00000539737 RCBTB2O95199 551 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 493.5 ms