RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-204ENST00000539463 PCNX3Q9H6A9 2034 aa23.3■■□□□ 1.32
DENR-204ENST00000539463 A0A087WZY1 265 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 NPIPA5A0A0B4J1W7 369 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 RNF103-CHMP3A0A140T963 221 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 TRPC5OSA6NMA1 111 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 NPIPA7E9PJI5 369 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 NPIPA8P0DM63 369 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 MATN1P21941 496 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 EPHA3P29320 983 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 CLNS1AP54105 237 aaKnown RBP23.29■■□□□ 1.32
DENR-204ENST00000539463 CLDN20P56880 219 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 EEFSECP57772 596 aaKnown RBP23.29■■□□□ 1.32
DENR-204ENST00000539463 KLHL26Q53HC5 615 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 SPANXN4Q5MJ08 99 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 AGBL2Q5U5Z8 902 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 CHMP1BQ7LBR1 199 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 VPS37AQ8NEZ2 397 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 ACTRT2Q8TDY3 377 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 LRRC46Q96FV0 321 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 SH3YL1Q96HL8 342 aaPredicted RBP23.29■■□□□ 1.32
DENR-204ENST00000539463 SFXN3Q9BWM7 321 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 AP4B1Q9Y6B7 739 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 MYO9AB2RTY4 2548 aa23.29■■□□□ 1.32
DENR-204ENST00000539463 GOLGA8QA0A0J9YX86 632 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 GOLGA8OA6NCC3 632 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 E9PBE3 544 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 GOLGA8NF8WBI6 632 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 SLCO1B7G3V0H7 640 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 SEC14L5O43304 696 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 CPSF4O95639 269 aaKnown RBP23.28■■□□□ 1.32
DENR-204ENST00000539463 NME5P56597 212 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 UFM1P61960 85 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 DPY19L1Q2PZI1 675 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 FAM174BQ3ZCQ3 159 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 GCNT2Q8N0V5 402 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 SDF2Q99470 211 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 KLHDC3Q9BQ90 382 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 MED17Q9NVC6 651 aa23.28■■□□□ 1.32
DENR-204ENST00000539463 FOXD3Q9UJU5 478 aaPredicted RBP23.28■■□□□ 1.32
DENR-204ENST00000539463 NUP214P35658 2090 aaPredicted RBP23.28■■□□□ 1.32
DENR-204ENST00000539463 DOCK7Q96N67 2140 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 DUXAA6NLW8 204 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 EEF1E1-BLOC1S5C9J1V9 151 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 NPIPB9F8W1W9 429 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 EEF1E1O43324 174 aaKnown RBP23.27■■□□□ 1.32
DENR-204ENST00000539463 TNFRSF21O75509 655 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 ZNF17P17021 662 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 CAPN3P20807 821 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 S100A3P33764 101 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 KIR2DL3P43628 341 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 ATP12AP54707 1039 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 FLYWCH1Q4VC44 716 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.27■■□□□ 1.32
DENR-204ENST00000539463 MTERF4Q7Z6M4 381 aaKnown RBP23.27■■□□□ 1.32
DENR-204ENST00000539463 GTPBP8Q8N3Z3 284 aaPredicted RBP23.27■■□□□ 1.32
DENR-204ENST00000539463 ZNF527Q8NB42 609 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 B4GALNT2Q8NHY0 566 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 PHOSPHO1Q8TCT1 267 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 SMPDL3BQ92485 455 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 NPAS1Q99742 590 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 ACBD3Q9H3P7 528 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 GPR45Q9Y5Y3 372 aa23.27■■□□□ 1.32
DENR-204ENST00000539463 C7orf72A4D263 438 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 SLC22A20A6NK97 555 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 KLF11O14901 512 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 UQCRC2P22695 453 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 PEX19P40855 299 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 RNF144AP50876 292 aaPredicted RBP23.26■■□□□ 1.31
DENR-204ENST00000539463 PLPPR5Q32ZL2 321 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 P4HA3Q7Z4N8 544 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 GGNQ86UU5 652 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 CHDHQ8NE62 594 aaPredicted RBP23.26■■□□□ 1.31
DENR-204ENST00000539463 MIPOL1Q8TD10 442 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 FIG4Q92562 907 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 ZNF75CPQ92670 426 aaPredicted RBP23.26■■□□□ 1.31
DENR-204ENST00000539463 ZBTB8AQ96BR9 441 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 SLC35G5Q96KT7 338 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 OTOGQ6ZRI0 2925 aa23.26■■□□□ 1.31
DENR-204ENST00000539463 ENO4A6NNW6 628 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 OIP5O43482 229 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 PSMA4P25789 261 aaKnown RBP23.25■■□□□ 1.31
DENR-204ENST00000539463 IL12AP29459 219 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 ZNF41P51814 821 aaPredicted RBP23.25■■□□□ 1.31
DENR-204ENST00000539463 CASP9P55211 416 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 ZNF117Q03924 483 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 MAVSQ7Z434 540 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 ZNF845Q96IR2 970 aaPredicted RBP23.25■■□□□ 1.31
DENR-204ENST00000539463 PINK1Q9BXM7 581 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 OR51I1Q9H343 314 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 CRIM1Q9NZV1 1036 aa23.25■■□□□ 1.31
DENR-204ENST00000539463 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.24■■□□□ 1.31
DENR-204ENST00000539463 A0A1W2PNV4 684 aa23.24■■□□□ 1.31
DENR-204ENST00000539463 C9JVG2 144 aa23.24■■□□□ 1.31
DENR-204ENST00000539463 TNFSF13O75888 250 aa23.24■■□□□ 1.31
DENR-204ENST00000539463 EEF1A1P68104 462 aaKnown RBP23.24■■□□□ 1.31
DENR-204ENST00000539463 ARHGAP11BQ3KRB8 267 aa23.24■■□□□ 1.31
DENR-204ENST00000539463 SLC9B1Q4ZJI4 515 aa23.24■■□□□ 1.31
DENR-204ENST00000539463 EEF1A1P5Q5VTE0 462 aa23.24■■□□□ 1.31
DENR-204ENST00000539463 SAXO2Q658L1 398 aa23.24■■□□□ 1.31
DENR-204ENST00000539463 NXNQ6DKJ4 435 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms