RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RPAP3Q9H6T3 665 aaPredicted RBP2.53□□□□□ -2
CCDC7-209ENST00000539197 CYP39A1Q9NYL5 469 aa2.53□□□□□ -2
CCDC7-209ENST00000539197 CD274Q9NZQ7 290 aa2.53□□□□□ -2
CCDC7-209ENST00000539197 ONECUT1Q9UBC0 465 aa2.53□□□□□ -2
CCDC7-209ENST00000539197 NOL7Q9UMY1 257 aaKnown RBP2.53□□□□□ -2
CCDC7-209ENST00000539197 DUSP12Q9UNI6 340 aa2.53□□□□□ -2
CCDC7-209ENST00000539197 STRAPQ9Y3F4 350 aaKnown RBP2.53□□□□□ -2
CCDC7-209ENST00000539197 TEX264Q9Y6I9 313 aa2.53□□□□□ -2
CCDC7-209ENST00000539197 RAD54L2Q9Y4B4 1467 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 MTCL1Q9Y4B5 1905 aaKnown RBP2.52□□□□□ -2.01
CCDC7-209ENST00000539197 IGHV7-81A0A0B4J1V7 117 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 SAGE2PA6NJ88 616 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 C19orf81C9J6K1 198 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 IMPA2O14732 288 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 ALOX15BO15296 676 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 ZBTB14O43829 449 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 MED6O75586 246 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 H2AFXP16104 143 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-209ENST00000539197 TSPAN8P19075 237 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 CCNCP24863 283 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 HTR1EP28566 365 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 ADORA2BP29275 332 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 HTR5AP47898 357 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 OSTNP61366 133 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 ACTN3Q08043 901 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-209ENST00000539197 CCDC40Q4G0X9 1142 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 OR8G2PQ6IF36 304 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 FAM159AQ6UWV7 190 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 DNM1P46Q6ZS02 220 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 MIER3Q7Z3K6 550 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 TICAM2Q86XR7 235 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 C20orf203Q8NBC4 194 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 MDS2Q8NDY4 140 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 TRUB1Q8WWH5 349 aaKnown RBP2.52□□□□□ -2.01
CCDC7-209ENST00000539197 MMP26Q9NRE1 261 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 OR1A1Q9P1Q5 309 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 MTRRQ9UBK8 725 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 KCNN3Q9UGI6 736 aa2.52□□□□□ -2.01
CCDC7-209ENST00000539197 EIF3LQ9Y262 564 aaKnown RBP2.52□□□□□ -2.01
CCDC7-209ENST00000539197 TMX2-CTNND1H3BSU7 103 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 DDX39AO00148 427 aaKnown RBP2.51□□□□□ -2.01
CCDC7-209ENST00000539197 VEGFDO43915 354 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 KERAO60938 352 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 TRIM3O75382 744 aaPredicted RBP2.51□□□□□ -2.01
CCDC7-209ENST00000539197 IGHV4-34P06331 123 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 OR8U8P0C7N1 319 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 GSTT2P0CG29 244 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 GSTT2BP0CG30 244 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 HLA-DPA1P20036 260 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 UGT1A5P35504 534 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 GCKP35557 465 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 RPL29P47914 159 aaKnown RBP2.51□□□□□ -2.01
CCDC7-209ENST00000539197 ZNF136P52737 540 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 SNX1Q13596 522 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 ZSWIM7Q19AV6 140 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 LRRC36Q1X8D7 754 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 RNF182Q8N6D2 247 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 ZSCAN4Q8NAM6 433 aaPredicted RBP2.51□□□□□ -2.01
CCDC7-209ENST00000539197 SUMF2Q8NBJ7 301 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 URGCPQ8TCY9 931 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 C7orf33Q8WU49 177 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 IL1F10Q8WWZ1 152 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 FOPNLQ96NB1 174 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 MBOAT4Q96T53 435 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 PLA2G2FQ9BZM2 168 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 NARFLQ9H6Q4 476 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 POLD4Q9HCU8 107 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 C1orf123Q9NWV4 160 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 DNPEPQ9ULA0 475 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 GMPPBQ9Y5P6 360 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 SLCO1B1Q9Y6L6 691 aa2.51□□□□□ -2.01
CCDC7-209ENST00000539197 DHX29Q7Z478 1369 aaKnown RBP2.5□□□□□ -2.01
CCDC7-209ENST00000539197 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.5□□□□□ -2.01
CCDC7-209ENST00000539197 TMEM150BA6NC51 233 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 A6NDX4 124 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 SCRG1O75711 98 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 NDUFA7O95182 113 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 BCKDHAP12694 445 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 PTPN6P29350 595 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 VLDLRP98155 873 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 ZNF154Q13106 437 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 CBX3Q13185 183 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 LASP1Q14847 261 aaKnown RBP2.5□□□□□ -2.01
CCDC7-209ENST00000539197 TSPO2Q5TGU0 170 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 Q8N9W7 124 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 MSANTD4Q8NCY6 345 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 OR2AP1Q8NGE2 309 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 HAVCR1Q96D42 359 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 SDSLQ96GA7 329 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 NSMCE2Q96MF7 247 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 ACAT2Q9BWD1 397 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 TBC1D10AQ9BXI6 508 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 ATG10Q9H0Y0 220 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 TMEM231Q9H6L2 316 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 KAT8Q9H7Z6 458 aaKnown RBP2.5□□□□□ -2.01
CCDC7-209ENST00000539197 COG4Q9H9E3 785 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 FANCFQ9NPI8 374 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 TRPV5Q9NQA5 729 aa2.5□□□□□ -2.01
CCDC7-209ENST00000539197 SPRR3Q9UBC9 169 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms