RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 GDNFP39905 211 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 CCR8P51685 355 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 CLVS2Q5SYC1 327 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 ZNF697Q5TEC3 545 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 HSD17B13Q7Z5P4 300 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 COQ8AQ8NI60 647 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 RGMAQ96B86 450 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 IFT27Q9BW83 186 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 ANKRD19PQ9H560 264 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 MGAT4CQ9UBM8 478 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 CA5BQ9Y2D0 317 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 MCRIP1C9JLW8 97 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 LGALS8O00214 317 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 PDCD5O14737 125 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 SC5DO75845 299 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 POP4O95707 220 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 CTSAP10619 480 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 CPN1P15169 458 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 POU3F2P20265 443 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 PBLDP30039 288 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 VEGFCP49767 419 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 KIAA1024LP59773 190 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 ST3GAL3Q11203 375 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 ZNF169Q14929 603 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 HENMT1Q5T8I9 393 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 ZNF620Q6ZNG0 422 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 OR9A1PQ8NGU1 263 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 DIO2Q92813 273 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 TTYH1Q9H313 450 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 SEMA4GQ9NTN9 838 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 HCSTQ9UBK5 93 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 NTN1O95631 604 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 MT-ND5P03915 603 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 ALPPL2P10696 532 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 KHKP50053 298 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 RAP2BP61225 183 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 PIP5KL1Q5T9C9 394 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 KHDRBS2Q5VWX1 349 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 SFRP4Q6FHJ7 346 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 TMEM173Q86WV6 379 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 KRT78Q8N1N4 520 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 STPG2Q8N412 459 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 TMEM99Q8N816 258 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 LILRB1Q8NHL6 650 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 CNOT9Q92600 299 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 TBX5Q99593 518 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 CFAP97Q9P2B7 532 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 HS3ST2Q9Y278 367 aa17.34■□□□□ 0.37
SFSWAP-207ENST00000538548 PLXNA2O75051 1894 aa17.33■□□□□ 0.37
SFSWAP-207ENST00000538548 DAPL1A0PJW8 107 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 FAM183AA6NL82 134 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 FCER2P06734 321 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 SNRPBP14678 240 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 BSGP35613 385 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 MLC1Q15049 377 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 EIF4E3Q8N5X7 224 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 TEX19Q8NA77 164 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 OR4D9Q8NGE8 314 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 FIBINQ8TAL6 211 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 TRMT2BQ96GJ1 504 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 ZNF764Q96H86 408 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 NDC1Q9BTX1 674 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 AUNIPQ9H7T9 357 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 ZCCHC3Q9NUD5 404 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 PRELID3BQ9Y3B1 194 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 CPSF4LA6NMK7 179 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 PRR23D1E9PI22 279 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 SYT5O00445 386 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 GMDSO60547 372 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 GALR3O60755 368 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 LDOC1O95751 146 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 TBX6O95947 436 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 FGBP02675 491 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 PRR23D2P0DMB1 279 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 HOXB3P14651 431 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 TYRP14679 529 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 ATF1P18846 271 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 ATP5A1P25705 553 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 SLC3A1Q07837 685 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 FUT5Q11128 374 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 HTR4Q13639 388 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 ETFDHQ16134 617 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 TMEM220Q6QAJ8 160 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 ALKAL2Q6UX46 152 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 ADCK2Q7Z695 626 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 SLC44A3Q8N4M1 653 aa17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 KLF2Q9Y5W3 355 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-207ENST00000538548 A0A0G2JPF8 293 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 POM121CA8CG34 1229 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 HNRNPCL2B2RXH8 293 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 HNRNPCL3B7ZW38 293 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 E9PI62 339 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 RP2O75695 350 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 HNRNPCL4P0DMR1 293 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 VIPR1P32241 457 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 GPR4P46093 362 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 VEGFBP49765 207 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 CCR9P51686 369 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 TAS2R43P59537 309 aa17.32■□□□□ 0.36
SFSWAP-207ENST00000538548 TMEM115Q12893 351 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms