RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 NTN3O00634 580 aaPredicted RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 XKRYO14609 159 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SERPINA7P05543 415 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 CDK4P11802 303 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SLC6A9P48067 706 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 TLE1Q04724 770 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 TSC22D1Q15714 1073 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ARSKQ6UWY0 536 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ZBTB49Q6ZSB9 765 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 PPP1R32Q7Z5V6 425 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 PROSER1Q86XN7 944 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ZDHHC21Q8IVQ6 265 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 TMEM151AQ8N4L1 468 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 C7orf57Q8NEG2 295 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 DNAJB8Q8NHS0 232 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 FBXL20Q96IG2 436 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 HSH2DQ96JZ2 352 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ZNF597Q96LX8 424 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 BTBD10Q9BSF8 475 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 CCDC28BQ9BUN5 200 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 OSBPL11Q9BXB4 747 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 WWTR1Q9GZV5 400 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 RAD21L1Q9H4I0 556 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 IKZF5Q9H5V7 419 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 FLRT3Q9NZU0 649 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ANAPC2Q9UJX6 822 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 YARS2Q9Y2Z4 477 aaKnown RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 A0A096LPE4 126 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 A0A1W2PPZ6 126 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 DHRS12A0PJE2 317 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 M0R129 80 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 CELA3AP09093 270 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 IL5RAQ01344 420 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 CYBRD1Q53TN4 286 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 FAM71E1Q6IPT2 247 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 NANOGNBQ7Z5D8 188 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 CD163Q86VB7 1156 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 LAS2Q8IYD9 372 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 HS3ST5Q8IZT8 346 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 BOLLQ8N9W6 283 aaKnown RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 SLC38A5Q8WUX1 472 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SLC47A1Q96FL8 570 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SCARF2Q96GP6 870 aaPredicted RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 ANKRD27Q96NW4 1050 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ZNF317Q96PQ6 595 aaPredicted RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 MYNNQ9NPC7 610 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 SACM1LQ9NTJ5 587 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 NDE1Q9NXR1 346 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 IKZF2Q9UKS7 526 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 GPR45Q9Y5Y3 372 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ARHGEF9O43307 516 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 KRT36O76013 467 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 FGF4P08620 206 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 UBL4AP11441 157 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 CD79AP11912 226 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 FGF5P12034 268 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 PRG2P13727 222 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 TACR3P29371 465 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 PTGS2P35354 604 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 RPP38P78345 283 aaKnown RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 SQSTM1Q13501 440 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 MYBPC3Q14896 1274 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 RGNQ15493 299 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 DPY19L1Q2PZI1 675 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 LACTB2Q53H82 288 aaPredicted RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 BLOC1S3Q6QNY0 202 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 FAM198BQ6UWH4 519 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ULK2Q8IYT8 1036 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 MVB12AQ96EY5 273 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 DENND2DQ9H6A0 471 aaPredicted RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 EXOSC4Q9NPD3 245 aaKnown RBP6.66□□□□□ -1.34
MSH6-209ENST00000538136 UBQLN4Q9NRR5 601 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 ZIM2Q9NZV7 527 aa6.66□□□□□ -1.34
MSH6-209ENST00000538136 MN1Q10571 1320 aaPredicted RBP6.65□□□□□ -1.34
MSH6-209ENST00000538136 OR5H15A6NDH6 313 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 PRAMEF25A6NGN4 478 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 SRRM3A6NNA2 597 aaPredicted RBP6.65□□□□□ -1.34
MSH6-209ENST00000538136 TNFRSF11BO00300 401 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 AKR7A3O95154 331 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 GADD45GO95257 159 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 TGDSO95455 350 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 LDLRP01130 860 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 PHC1P78364 1004 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 CEACAM7Q14002 265 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 WLSQ5T9L3 541 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 MFSD12Q6NUT3 480 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 NIPAL1Q6NVV3 410 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 XKR5Q6UX68 686 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 GALNT7Q86SF2 657 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 HOMEZQ8IX15 550 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 SLC15A3Q8IY34 581 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 CLIP4Q8N3C7 705 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 FNDC9Q8TBE3 224 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 GPR87Q9BY21 358 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 ELL3Q9HB65 397 aaPredicted RBP6.65□□□□□ -1.34
MSH6-209ENST00000538136 MAGED1Q9Y5V3 778 aaPredicted RBP6.65□□□□□ -1.34
MSH6-209ENST00000538136 FREM3P0C091 2139 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 TSC2P49815 1807 aa6.65□□□□□ -1.34
MSH6-209ENST00000538136 CFAP73A6NFT4 308 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms