RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PTHP01270 115 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR13C7P0DN81 318 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 GABRA5P31644 462 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 KDELR2P33947 212 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CASP7P55210 303 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ITPK1Q13572 414 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 UGT3A2Q3SY77 523 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CES4AQ5XG92 561 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 UEVLDQ8IX04 471 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR4M1Q8NGD0 313 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 MITD1Q8WV92 249 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 INTS14Q96SY0 518 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SORT1Q99523 831 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 MAGEH1Q9H213 219 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CD163L1Q9NR16 1453 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 UMAD1C9J7I0 102 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 M0R2N6 131 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 HTR3BO95264 441 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 AHRP35869 848 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PSMB10P40306 273 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TNK1Q13470 666 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 FAM209BQ5JX69 171 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 AWAT2Q6E213 333 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 IL17RCQ8NAC3 791 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 POFUT1Q9H488 388 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SLC32A1Q9H598 525 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 DCAF13Q9NV06 445 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 UBIAD1Q9Y5Z9 338 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 RAD1O60671 282 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 FKTNO75072 461 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CMPK1P30085 196 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TIA1P31483 386 aaKnown RBP eCLIP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PRSS58Q8IYP2 241 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM130Q8N3G9 435 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR52E2Q8NGJ4 325 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR1S1Q8NH92 325 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 NETO1Q8TDF5 533 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SETD7Q8WTS6 366 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CMKLR1Q99788 373 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 URM1Q9BTM9 101 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 HINT2Q9BX68 163 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 POLDIP3Q9BY77 421 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ZDHHC3Q9NYG2 299 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PCDHA2Q9Y5H9 948 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PXDNQ92626 1479 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 C1QTNF3-AMACRE9PGA6 284 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 P2RX6O15547 441 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CELF2O95319 508 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 QDPRP09417 244 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 JUNBP17275 347 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PFKLP17858 780 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ZP3P21754 424 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 GALNT2Q10471 571 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SLC14A1Q13336 389 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ADIRFQ15847 76 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 VGLL2Q8N8G2 317 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR52P1PQ8NH57 321 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SMPDL3BQ92485 455 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 HCAR1Q9BXC0 346 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PARP12Q9H0J9 701 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PIGMQ9H3S5 423 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 MEPEQ9NQ76 525 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ASAH2Q9NR71 780 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 FBXO8Q9NRD0 319 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SLC22A11Q9NSA0 550 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 RLIMQ9NVW2 624 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 KLRG2A4D1S0 409 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CLDN24A6NM45 220 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 MT-CO2P00403 227 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TAS2R20P59543 309 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TAF1CQ15572 869 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 LYPD4Q6UWN0 246 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 DEFB128Q7Z7B8 93 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR5M8Q8NGP6 311 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 RAB39BQ96DA2 213 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 BTF3L4Q96K17 158 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TSGA13Q96PP4 275 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ARHGAP39Q9C0H5 1083 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PIGVQ9NUD9 493 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ATXN7L1Q9ULK2 861 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 NDUFS4O43181 175 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SLC10A3P09131 477 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SERPINA2P20848 420 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 APEX1P27695 318 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ARL2P36404 184 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 RAP1AP62834 184 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TP53I3Q53FA7 332 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 NCBP2-AS2Q69YL0 99 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 DCLRE1CQ96SD1 692 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SLCO5A1Q9H2Y9 848 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM231Q9H6L2 316 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CXXC1Q9P0U4 656 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 NQO2P16083 231 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PSMB1P20618 241 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 LMO2P25791 158 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF41P51814 821 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SELENBP1Q13228 472 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 KEAP1Q14145 624 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR4K5Q8NGD3 323 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR51Q1Q8NH59 317 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms