RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ANKRD61A6NGH8 418 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 DVL2O14641 736 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 FRS3O43559 492 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 PLPP2O43688 288 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 UBL3O95164 117 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 MT-ND5P03915 603 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 SULT1A3P0DMM9 295 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 SULT1A4P0DMN0 295 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 UGT2B7P16662 529 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 POLR2CP19387 275 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CSNK2A2P19784 350 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 SHC1P29353 583 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 MMP15P51511 669 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 TGM3Q08188 693 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 SLC36A2Q495M3 483 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 FNDC3BQ53EP0 1204 aaKnown RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 GPR139Q6DWJ6 353 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 MRM1Q6IN84 353 aaKnown RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 BTN2A1Q7KYR7 527 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 NRMQ8IXM6 262 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CMIPQ8IY22 773 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 TIGD4Q8IY51 512 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 TOMM5Q8N4H5 51 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 NUP43Q8NFH3 380 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 OR5W2Q8NH69 310 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 OR8D1Q8WZ84 308 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 HERVK_113Q902F9 699 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 NXPE3Q969Y0 559 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 ARRDC3Q96B67 414 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 COX14Q96I36 57 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 SAMD8Q96LT4 415 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 NDC1Q9BTX1 674 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 C1QTNF2Q9BXJ5 285 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CLEC4MQ9H2X3 399 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 WBP1LQ9NX94 342 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 ABRACLQ9P1F3 81 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CHST2Q9Y4C5 530 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 NPFFR2Q9Y5X5 522 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 C2orf16Q68DN1 1984 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 RPS10-NUDT3A0A1W2PQS6 291 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 LRIT2A6NDA9 550 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 GSTZ1O43708 216 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 PIP5K1CO60331 668 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 FZD7O75084 574 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 ERAL1O75616 437 aaKnown RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 SLC2A10O95528 541 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 PSMB5P28074 263 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CEBPEQ15744 281 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 HNRNPA1L2Q32P51 320 aaKnown RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 UAP1L1Q3KQV9 507 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 RPL13AP3Q6NVV1 102 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 LYPD4Q6UWN0 246 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 IL20RBQ6UXL0 311 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 ADAMTSL4Q6UY14 1074 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 B3GLCTQ6Y288 498 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 ERN2Q76MJ5 926 aaKnown RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 C16orf62Q7Z3J2 963 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 PXKQ7Z7A4 578 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 LRRTM4Q86VH4 590 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 OR8H3Q8N146 312 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 TMEM99Q8N816 258 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 OR52L1Q8NGH7 329 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 HSD17B8Q92506 261 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 YIPF5Q969M3 257 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 NXPE2Q96DL1 559 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 RSPRY1Q96DX4 576 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CLIP3Q96DZ5 547 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 OMA1Q96E52 524 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CNRIP1Q96F85 164 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 C16orf58Q96GQ5 468 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 C17orf62Q9BQA9 187 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 ACTR6Q9GZN1 396 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 AICDAQ9GZX7 198 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 QRSL1Q9H0R6 528 aaKnown RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 UBQLN3Q9H347 655 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 CACYBPQ9HB71 228 aaKnown RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 UCKL1Q9NWZ5 548 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 UBQLN2Q9UHD9 624 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 SCP2D1Q9UJQ7 156 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 SIRT4Q9Y6E7 314 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-218ENST00000537641 KCNE3Q9Y6H6 103 aa11.32□□□□□ -0.6
CPSF7-218ENST00000537641 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
CPSF7-218ENST00000537641 A0A0G2JN53 185 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 DAPL1A0PJW8 107 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 UNC119BA6NIH7 251 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 SLC9B1P1A6NJY1 282 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 SLC22A31A6NKX4 558 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 PRRT4C9JH25 899 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 CTDSPLO15194 276 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 HYAL3O43820 417 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-218ENST00000537641 LCMT2O60294 686 aaKnown RBP11.31□□□□□ -0.6
CPSF7-218ENST00000537641 SC5DO75845 299 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 AGR2O95994 175 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 THY1P04216 161 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 H2AFB2P0C5Z0 115 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 F3P13726 295 aa11.31□□□□□ -0.6
CPSF7-218ENST00000537641 TSFMP43897 325 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms