RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ZC3HAV1LQ96H79 300 aaKnown RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 TMEM43Q9BTV4 400 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 ALG8Q9BVK2 526 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 YIPF2Q9BWQ6 316 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 ENKD1Q9H0I2 346 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 TMEM74BQ9NUR3 256 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 NLKQ9UBE8 527 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 PHF11Q9UIL8 331 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 ADAM30Q9UKF2 790 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 SIRT4Q9Y6E7 314 aaPredicted RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 CLCA3PQ9Y6N3 262 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 TBC1D3DA0A087WVF3 549 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 TBC1D3IA0A087WXS9 549 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 TBC1D3EA0A087X179 549 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 TRAPPC13A5PLN9 417 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 TBC1D3LB9A6J9 549 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 P2RX6O15547 441 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 RGS9O75916 674 aaPredicted RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 TBC1D3HP0C7X1 549 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 CFL1P23528 166 aaKnown RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 PTBP1P26599 531 aaKnown RBP eCLIP13.32□□□□□ -0.28
USP44-203ENST00000537435 CTBP2P56545 445 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 GPM6BQ13491 265 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 SUZ12Q15022 739 aaKnown RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 TBC1D3CQ6IPX1 549 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 NUDT18Q6ZVK8 323 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 MEPCEQ7L2J0 689 aaKnown RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 SAMD14Q8IZD0 417 aaPredicted RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 TBC1D3Q8IZP1 549 aaPredicted RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 TMEM99Q8N816 258 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 OR52L1Q8NGH7 329 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 RIPOR3Q96MK2 946 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 CD180Q99467 661 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 C1QTNF7Q9BXJ2 289 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 ADAP2Q9NPF8 381 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 C20orf141Q9NUB4 165 aa13.32□□□□□ -0.28
USP44-203ENST00000537435 SIDT1Q9NXL6 827 aaKnown RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 ZNF223Q9UK11 482 aaPredicted RBP13.32□□□□□ -0.28
USP44-203ENST00000537435 NPIPA5A0A0B4J1W7 369 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 FAM240BA0A1B0GVZ2 78 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 NPIPA7E9PJI5 369 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 THBS1P07996 1170 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 FAM157BP0CG42 384 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 NPIPA8P0DM63 369 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 BDH1Q02338 343 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 RIN1Q13671 783 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 NR2C2APQ86WQ0 139 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 DUSP18Q8NEJ0 188 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 SCARF2Q96GP6 870 aaPredicted RBP13.31□□□□□ -0.28
USP44-203ENST00000537435 SERINC2Q96SA4 455 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 HCAR1Q9BXC0 346 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 ZNF350Q9GZX5 532 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 SRMSQ9H3Y6 488 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 PIGUQ9H490 435 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 BABAM2Q9NXR7 383 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 DAPP1Q9UN19 280 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 ALG5Q9Y673 324 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 C2orf16Q68DN1 1984 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 POM121BA6NF01 834 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 BHLHE40O14503 412 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 HRO43593 1189 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 SMIM10L1P0DMW3 83 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 IFI30P13284 250 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 BMP7P18075 431 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 GALP22466 123 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 ALAS2P22557 587 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 INPP1P49441 399 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 ADPRHP54922 357 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 OR1Q1Q15612 314 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 KLHL12Q53G59 568 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 MRPL2Q5T653 305 aaKnown RBP13.31□□□□□ -0.28
USP44-203ENST00000537435 IDNKQ5T6J7 187 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 RD3Q7Z3Z2 195 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 ZNF438Q7Z4V0 828 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 ZNF619Q8N2I2 560 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 TMEM239Q8WW34 195 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 UPRTQ96BW1 309 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 SMIM10Q96HG1 83 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 HS6ST2Q96MM7 605 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 OR2A5Q96R48 311 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 TIMP4Q99727 224 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 KXD1Q9BQD3 176 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 KCNN2Q9H2S1 579 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 FN3KQ9H479 309 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 FBXO34Q9NWN3 711 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 ZNF624Q9P2J8 865 aaPredicted RBP13.31□□□□□ -0.28
USP44-203ENST00000537435 CHD9Q3L8U1 2897 aa13.31□□□□□ -0.28
USP44-203ENST00000537435 ZNF860A6NHJ4 632 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 SCO2O43819 266 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 B3GALT2O43825 422 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 SLC19A2O60779 497 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 CTSVO60911 334 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 CHRNB1P11230 501 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 CPMP14384 443 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 ELK1P19419 428 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 TLX1P31314 330 aaPredicted RBP13.3□□□□□ -0.28
USP44-203ENST00000537435 PPP2CBP62714 309 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 PPP2CAP67775 309 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms