RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SF3A2Q15428 464 aaKnown RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 NDUFAF6Q330K2 333 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 ZNF311Q5JNZ3 666 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 FCRL6Q6DN72 434 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 PAMR1Q6UXH9 720 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 PTCHD4Q6ZW05 846 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 RNF44Q7L0R7 432 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 SLC37A3Q8NCC5 494 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 OR6C4Q8NGE1 309 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 OR8J3Q8NGG0 315 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 TANKQ92844 425 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 TSLPQ969D9 159 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 ZDHHC12Q96GR4 267 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 SNX18Q96RF0 628 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 FNDC11Q9BVV2 318 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 TTTY10Q9BZA0 68 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 RACGAP1Q9H0H5 632 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 SAV1Q9H4B6 383 aaPredicted RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 PRTFDC1Q9NRG1 225 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 DOCK7Q96N67 2140 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 FANCMQ8IYD8 2048 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 FOXE1O00358 373 aaPredicted RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 TOXO94900 526 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 HTR1EP28566 365 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 C21orf33P30042 268 aaPredicted RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 LIM2P55344 173 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 LGALS3BPQ08380 585 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 MAP4K2Q12851 820 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 TARDBPQ13148 414 aaKnown RBP eCLIP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 SWI5Q1ZZU3 235 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 LCN1P1Q5VSP4 162 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 MZT2AQ6P582 158 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 LAPTM4BQ86VI4 370 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 BPHLQ86WA6 291 aaPredicted RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 LRRC25Q8N386 305 aaPredicted RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 OR4N2Q8NGD1 307 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 JSRP1Q96MG2 331 aaPredicted RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 AMDHD1Q96NU7 426 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 BEX1Q9HBH7 125 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 APMAPQ9HDC9 416 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 PRDM7Q9NQW5 492 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 FBXO34Q9NWN3 711 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 THUMPD1Q9NXG2 353 aaKnown RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 EIF3KQ9UBQ5 218 aaKnown RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 MRPS33Q9Y291 106 aaKnown RBP7.68□□□□□ -1.18
ABCA4-207ENST00000536513 WDR45Q9Y484 360 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 PLXND1Q9Y4D7 1925 aa7.68□□□□□ -1.18
ABCA4-207ENST00000536513 C1orf226A1L170 272 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 ATP6V1G2-DDX39BF2Z307 99 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 CASKO14936 926 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 KIAA0513O60268 411 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 KDM4BO94953 1096 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 GADD45GO95257 159 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 TBX6O95947 436 aaPredicted RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 STSP08842 583 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 FOLR1P15328 257 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 NME1P15531 152 aaKnown RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 TGM1P22735 817 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 EPHA2P29317 976 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 CSTF2P33240 577 aaKnown RBP eCLIP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 PIGAP37287 484 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 RPL3P39023 403 aaKnown RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 RPL35P42766 123 aaKnown RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 LSM11P83369 360 aaKnown RBP eCLIP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 IFITM3Q01628 133 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 RHAGQ02094 409 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 MAB21L1Q13394 359 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 C14orf28Q4W4Y0 310 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 C1orf122Q6ZSJ8 110 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 GDPD3Q7L5L3 318 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 GALNT11Q8NCW6 608 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 GPBAR1Q8TDU6 330 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 ZNF431Q8TF32 576 aaPredicted RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 TESCQ96BS2 214 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 DGAT2Q96PD7 388 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 OR2A5Q96R48 311 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 TREX2Q9BQ50 279 aaPredicted RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 SERHL2Q9H4I8 314 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 ANKRD10Q9NXR5 420 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 MRPL39Q9NYK5 338 aaKnown RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 H3BSH0 61 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 ZNF749O43361 778 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 ORC5O43913 435 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 IGFBP1P08833 259 aaPredicted RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 ERP29P30040 261 aaKnown RBP7.67□□□□□ -1.18
ABCA4-207ENST00000536513 FBXW4P57775 412 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 CDC42P60953 191 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 MVKQ03426 396 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 FGFBP1Q14512 234 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 POU4F3Q15319 338 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 BCL2A1Q16548 175 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 IFI44LQ53G44 452 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 SLC35F1Q5T1Q4 408 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 OR2T5Q6IEZ7 315 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 REEP3Q6NUK4 255 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 SLC36A4Q6YBV0 504 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 TMEM179BQ7Z7N9 219 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 ZZZ3Q8IYH5 903 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 PLPP7Q8NBV4 271 aa7.67□□□□□ -1.18
ABCA4-207ENST00000536513 OR7G2Q8NG99 324 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms